Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., preprotein translocase subunit SecF from Pseudomonas simiae WCS417

 Score =  276 bits (705), Expect = 6e-79
 Identities = 140/308 (45%), Positives = 213/308 (69%), Gaps = 7/308 (2%)

Query: 9   KMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSA 68
           + I+FM     AF +++++   ++F+   K LN+GLDFTGGTLIE+ +E+PA++  +RS 
Sbjct: 3   RTINFMGVRNVAFGVTVLLTVLALFSWFHKGLNYGLDFTGGTLIELTYEKPADVTLVRSE 62

Query: 69  LEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGN-VEMRRIEFV 127
           L   G+ +A VQ+FG+  D++VR+   D      LG+Q+  A+++  G N   ++R+EFV
Sbjct: 63  LVKAGYHEAIVQSFGATTDLLVRMPGEDPQ----LGHQVAEALQKVGGDNPASVKRVEFV 118

Query: 128 GPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIE 187
           GP VG+EL + GGL +L++L+ I++Y++ RF+W+   GA+++L HDVI+T+GI +  QI 
Sbjct: 119 GPQVGEELRDQGGLGMLMALVGIMIYLAFRFQWKFGVGAIVSLIHDVIVTVGILAYFQIT 178

Query: 188 VDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGT 247
            DLT++AA+L ++GYSLNDTIVVFDR+RENFR +RK    E +N S TQTL RT+ TS +
Sbjct: 179 FDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRVLRKATLIENINISTTQTLLRTMATSIS 238

Query: 248 TLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPPQVEKE 307
           TL  + AL   GG  + GF+LAL +G+  GTYSSIY+A+ + + L +  E L+PP     
Sbjct: 239 TLLAIAALMIFGGDNLWGFSLALFIGVLAGTYSSIYIANVVLIWLNLNSEDLIPP--AST 296

Query: 308 GAELDEMP 315
           G E+D+ P
Sbjct: 297 GKEVDDRP 304