Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Protein translocase subunit SecF from Variovorax sp. SCN45

 Score =  253 bits (645), Expect = 6e-72
 Identities = 133/311 (42%), Positives = 206/311 (66%), Gaps = 4/311 (1%)

Query: 3   QILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANL 62
           +  +  K I FMR +     +S+V  A ++F L  + L+  ++FTGGT+IEV +EQ A++
Sbjct: 2   EFFRIHKTIPFMRHAVVLNIVSVVTFALAVFFLFHRGLHLSVEFTGGTVIEVAYEQSADI 61

Query: 63  EQIRSALEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMR 122
            ++R A+   G+ +  VQN+G++RDV +RL  +  M+ +    Q++ A+K     +   R
Sbjct: 62  GKVRDAVTKLGYPEVQVQNYGTSRDVQIRLPAQKGMSSDQQSAQVMQALKS-VDPSATQR 120

Query: 123 RIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFS 182
            IE VGP VG+ELT  G  A+ + ++ I++Y++ RFEW+ A   VLA  HDV+I LG F+
Sbjct: 121 GIEVVGPQVGEELTTNGLKALGMVVVGIMIYLAFRFEWKFALATVLANLHDVVIILGFFA 180

Query: 183 ILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTL 242
             Q E  L ++AA+L V+GYS+N+++V+FDRIRENFR+ RK    EI++++IT T+SRT+
Sbjct: 181 FFQWEFSLAVLAAVLAVLGYSVNESVVIFDRIRENFRRYRKMTTTEIIDNAITSTISRTI 240

Query: 243 ITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLL-- 300
           IT G+T  VV+++F  GG  +H FALAL +GI  G YSS +VA+A+A+ LGI RE L+  
Sbjct: 241 ITHGSTQLVVLSMFFFGGPTLHYFALALTIGICFGIYSSCFVAAAIAMWLGIKREDLVKG 300

Query: 301 -PPQVEKEGAE 310
            PP+ + E  +
Sbjct: 301 GPPKRDGESGD 311