Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Protein translocase subunit SecD from Variovorax sp. SCN45

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 56/267 (20%), Positives = 123/267 (46%), Gaps = 28/267 (10%)

Query: 47  TGGTLIEV--GFEQPANLEQIRSALEAKG---FGDATVQNFGSARDVMV----------- 90
           TG  L +   GF+Q +N  ++   ++AKG     D + +N+     +++           
Sbjct: 331 TGENLTDAQPGFDQQSNQPKVDLTMDAKGGRIMRDVSRENYKKRMAMLIFEKGKGEVLTA 390

Query: 91  -----RLRPRDDMAGEAL---GNQILAAIKEGT-GGNVEMRRIEFVGPNVGDELTEAGGL 141
                 L  R  ++G       N +   ++ G+    +E+ +   +GP +G +  E G  
Sbjct: 391 PSINGELGNRFQVSGSMTVVEANDLALLLRAGSLAAPMEIIQERTIGPTLGADNIEKGFK 450

Query: 142 AILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIEVDLTIVAALLTVVG 201
           +++   L I++++   +       + +ALA ++++ + I S+LQ  + L  +AA+   +G
Sbjct: 451 SVMYGFLAIMVFMCAYYAL-FGLFSSIALAVNLMLLVAILSMLQATLTLPGIAAMALAIG 509

Query: 202 YSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGTTLFVVIALFTQGGA 261
            +++  +++ +R+RE  R      P   +++   +     L ++ TTL   IAL   G  
Sbjct: 510 VAIDSNVLINERVREELR--NGASPQAAIHAGYERAWGTILDSNVTTLIAGIALLAFGSG 567

Query: 262 MIHGFALALLLGITVGTYSSIYVASAL 288
            + GFA+   +GI    +S+++ +  L
Sbjct: 568 PVRGFAVVHCIGIVTSMFSAVFFSRGL 594