Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Protein translocase subunit SecF from Sphingobium sp. HT1-2

 Score =  210 bits (535), Expect = 3e-59
 Identities = 108/298 (36%), Positives = 181/298 (60%), Gaps = 4/298 (1%)

Query: 1   MFQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPA 60
           + +++  +  I F++   +AF L+L++   ++     K LN G+DF GG +IE  F Q  
Sbjct: 3   LLKLVPDNTNIGFVKLRHWAFGLTLLLTVLAVGATFYKGLNLGVDFVGGLMIEAKFPQAV 62

Query: 61  NLEQIRSALEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIK---EGTGG 117
             +++R  +     G++++Q FG  + V +RL P  +  G    N ++   +   E    
Sbjct: 63  ETDKVRDTIAGLRVGESSLQQFGDPKTVQIRL-PLPEQGGAGAANAVVEKTRKAMEAQFP 121

Query: 118 NVEMRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIIT 177
            V   R + V   V  EL + G LA++++++ I ++   R+EW+      +A+ HDV++T
Sbjct: 122 GVTFSRYDTVSGKVSGELIQNGVLAVVLAIIGIAIFSWFRYEWQFGVSTFVAIVHDVLMT 181

Query: 178 LGIFSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQT 237
           LG F++ Q+E DL I+AA+LT+VGYS+ND +V+ DRIREN RK RK +   +++ S+ +T
Sbjct: 182 LGFFAVTQLEFDLNIIAAVLTIVGYSINDKMVIDDRIRENMRKYRKMDMKSLIDLSVNET 241

Query: 238 LSRTLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGIT 295
           L RT++TS T L  + AL   GG ++ GF  A++LGI VGTYSS+YV+S+L + LG++
Sbjct: 242 LPRTVMTSVTILLALGALLLLGGHVLRGFTAAMMLGIIVGTYSSVYVSSSLLITLGLS 299