Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Sec translocation complex subunit SecF from Pseudomonas putida KT2440

 Score =  287 bits (734), Expect = 3e-82
 Identities = 148/308 (48%), Positives = 220/308 (71%), Gaps = 8/308 (2%)

Query: 9   KMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSA 68
           K I+FM     AFA+++++   ++F+   K LN+GLDFTGGTLIE+ +E+PA+++ +R+ 
Sbjct: 2   KTINFMGVRNVAFAVTVLLTVLALFSWWQKGLNFGLDFTGGTLIELTYERPADVKAVRAE 61

Query: 69  LEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGN-VEMRRIEFV 127
           L   GF +A VQ+FG+  D++VR+   D M    LGN++  A+++  G N  +++R+EFV
Sbjct: 62  LVESGFNEAVVQSFGATTDLLVRMPGDDPM----LGNKVAEALQKAGGDNPAKVKRVEFV 117

Query: 128 GPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIE 187
           GP VG+EL + GG+ +L++L  IL+Y++ RF+W+ A GA+++L HDV++TLGI S  QI 
Sbjct: 118 GPQVGEELRDQGGIGMLLALGGILIYLAFRFQWKFAVGAIVSLIHDVVVTLGILSFFQIT 177

Query: 188 VDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGT 247
            DLT++AA+L ++GYSLNDTIVVFDR+RENFR MRK    E +N S TQTL RT+ TS +
Sbjct: 178 FDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRVMRKASLIENINVSTTQTLLRTVATSVS 237

Query: 248 TLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPPQVEKE 307
           TL  + AL   GG  + GF+LAL +G+  GTYSSIY+A+ + + L ++ E L+PP V+ E
Sbjct: 238 TLLAIAALLFFGGDNLFGFSLALFIGVMAGTYSSIYIANVVLIWLNLSSEDLIPP-VKAE 296

Query: 308 GAELDEMP 315
           G  +DE P
Sbjct: 297 G--VDERP 302