Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., Protein-export membrane protein SecF (TC 3.A.5.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  355 bits (912), Expect = e-103
 Identities = 173/309 (55%), Positives = 239/309 (77%), Gaps = 1/309 (0%)

Query: 3   QILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANL 62
           Q+    K+ DFMRW  +AF +S +++ A+I  +  +  NWGLDFTGGT+IE+  E+PA +
Sbjct: 9   QLNHGRKVYDFMRWDFWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEM 68

Query: 63  EQIRSALEAKGFGDATVQNFGSARDVMVRLRPRD-DMAGEALGNQILAAIKEGTGGNVEM 121
           + +R AL+  G+ +  +QNFGS+ D+MVR+ P + +  G+ LG++++  I E T  N  +
Sbjct: 69  DVMREALQKAGYEEPQLQNFGSSHDIMVRMPPTEGETGGQVLGSKVVTIINEATNQNAAV 128

Query: 122 RRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIF 181
           +RIEFVGP+VG +L + G +A+LV+L+ IL+YV  RFEWRLAAG V+ALAHDVIITLGI 
Sbjct: 129 KRIEFVGPSVGADLAQTGAMALLVALISILVYVGFRFEWRLAAGVVIALAHDVIITLGIL 188

Query: 182 SILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRT 241
           S+  IE+DLTIVA+L++V+GYSLND+IVV DRIRENFRK+R+  P EI N S+TQTL RT
Sbjct: 189 SLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRT 248

Query: 242 LITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLP 301
           LITSGTTL V++ L+  GG ++ GF+L +L+G+++GT SSIYVASALALKLG+ REH+L 
Sbjct: 249 LITSGTTLVVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQ 308

Query: 302 PQVEKEGAE 310
            +VEKEGA+
Sbjct: 309 QKVEKEGAD 317