Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 989 a.a., protein-export membrane protein, SecD/SecF family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  173 bits (438), Expect = 2e-47
 Identities = 102/304 (33%), Positives = 164/304 (53%), Gaps = 22/304 (7%)

Query: 11  IDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSALE 70
           IDF+   K A+ +S  +I   +       L +G+DFTGG    V F +P     +++ L+
Sbjct: 670 IDFLGKRKVAYLISTGIIIIGLAFAVINGLKFGVDFTGGRSYIVEFAEPVAASDLKTGLD 729

Query: 71  AKGFGDATVQNFGSARDVMVR----LRPRDDMAGEALGNQILAAIKEGTGGN-----VEM 121
               G    + +GS   + +     +    D A   +  ++   I + TG +      +M
Sbjct: 730 KAFDGSVEAKTYGSNNVIKITTSYLINDDSDEANSEVATKVREGIADVTGFSFVDEVAQM 789

Query: 122 RRIEF-------VGPNVGDELTEAGGLAILVSLLCILLYVSVRF-EWRLAAGAVLALAHD 173
               F       VG  V D++  +   A+  +L+ I LY+ +RF +W+ +  +++ALAHD
Sbjct: 790 GDSSFAITGSSKVGATVADDIKNSSMEAMFFALVAIFLYILLRFRKWQYSLASIIALAHD 849

Query: 174 VIITLGIFSILQ-----IEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAE 228
            +  +  F+I        E+D   +AA+LTV+GYS+NDT++VFDRIREN       +  +
Sbjct: 850 TLFVVAAFAIASAFGATFEIDQVFIAAMLTVIGYSINDTVIVFDRIRENITNRGTSKLVK 909

Query: 229 IMNSSITQTLSRTLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASAL 288
           + N +I QT++RTLITS TTL VVI L   GG ++ GF+ AL +G+ VGTYSSIY+A+ +
Sbjct: 910 MFNDAINQTMARTLITSFTTLIVVIVLLIFGGEVLRGFSFALFVGVLVGTYSSIYIATPI 969

Query: 289 ALKL 292
            + L
Sbjct: 970 VVDL 973



 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 38/162 (23%), Positives = 81/162 (50%), Gaps = 3/162 (1%)

Query: 127 VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQI 186
           +GP +G E  +A G+  +V+ L I++   + +  +    A+ AL  ++   LGI + L  
Sbjct: 483 IGPTLGKE-AQAQGINSMVAGLVIVVLFMIAYYAKGGFVAIAALVFNIFFILGILAQLGT 541

Query: 187 EVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSG 246
            + L  +A ++  +G S++  +++F+RI+E           + + S   +  S  L ++ 
Sbjct: 542 ALTLPGIAGIVLTIGMSIDANVLIFERIKEEL--AAGAGLLQAITSGYNKAFSAILDSNV 599

Query: 247 TTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASAL 288
           TT      L+  G   + GFA+ L++GI    +S++++   +
Sbjct: 600 TTFLTGAILYALGQGPVKGFAIVLMIGIASSFFSAVFITRVI 641