Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., preprotein translocase subunit SecF from Alteromonas macleodii MIT1002

 Score =  402 bits (1033), Expect = e-117
 Identities = 202/313 (64%), Positives = 253/313 (80%), Gaps = 1/313 (0%)

Query: 3   QILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANL 62
           Q+LK    ++FMR    A  LS V+I  S  +L    LNWGLDFTGGTLIEVG+E  ANL
Sbjct: 2   QLLKLSDTVNFMRLRIPAMVLSTVLILGSFVSLGVNSLNWGLDFTGGTLIEVGYEDAANL 61

Query: 63  EQIRSALEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMR 122
           E IR+ L    F DA VQNFGS++DV++R+ PRD +    +G Q+LAA++   G  V+MR
Sbjct: 62  EGIRAQLNEANFEDAIVQNFGSSQDVLIRIAPRDGVKAVTIGEQVLAALR-ADGTEVDMR 120

Query: 123 RIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFS 182
           RIEFVGPNVG+ELTE GGLA+LV+LLCIL+YV++RFEWR A G+V ALAHDVI+TLG+FS
Sbjct: 121 RIEFVGPNVGEELTEQGGLAMLVALLCILVYVAMRFEWRFALGSVSALAHDVILTLGLFS 180

Query: 183 ILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTL 242
           +LQIE DLT++AA+L V+GYSLNDTIVV DRIRENFRK+RK EP EI+N S+TQTL+RT+
Sbjct: 181 VLQIEFDLTVLAAVLAVIGYSLNDTIVVCDRIRENFRKIRKGEPVEIINISLTQTLNRTI 240

Query: 243 ITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPP 302
           ITS TT+ V++ALF +GGA+IHGFA ALL G+ VGTYSS+Y+AS++AL LGI++E L+PP
Sbjct: 241 ITSLTTVLVLVALFYKGGALIHGFATALLFGVVVGTYSSVYIASSVALALGISKEDLMPP 300

Query: 303 QVEKEGAELDEMP 315
           QVEKEGA+LD MP
Sbjct: 301 QVEKEGADLDPMP 313