Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., protein translocase subunit SecD from Rhodanobacter sp000427505 FW510-R12

 Score =  484 bits (1246), Expect = e-141
 Identities = 273/628 (43%), Positives = 394/628 (62%), Gaps = 13/628 (2%)

Query: 2   LNRYPLWKYLMVMLTIAVAALYALPNIYGEDPAIQITGARGAS-VDMSTLDAVTDALNKA 60
           ++ +P WKY +V L +    +YALPN +   PA+Q+T  R A  ++ +    V  AL   
Sbjct: 1   MSDFPRWKYALVALVMLFGIIYALPNAFPPVPAVQVTANRDAPPINQAVQQKVQAALTAK 60

Query: 61  QLSQKSIALENGSILVRFNDTDTQISARDIISEALGKDKIVALNLAPSTPYWLESIGAAP 120
           +++   + +E   +L  F ++D Q S  + I  ALG    VA  L  + P WL +IGA  
Sbjct: 61  KIAVTDVFMEGDHLLATFANSDVQKSGLEEIKAALGDGYTVAFKLQSNVPRWLSAIGARA 120

Query: 121 MKLGLDLRGGVHFLMEVDMDAAMEKLVSQQEEAFRSDLRDEKIRYRAIRPLS---DAVEV 177
           M LGLDL+GGVHFLM+VD   A+EK  +   +  RS LR + IRY ++   +     + V
Sbjct: 121 MPLGLDLQGGVHFLMQVDQKDAIEKQENSYADDIRSLLRQKNIRYESVTRNAAGGQGIAV 180

Query: 178 TLRDAEQLAQTKLLLESKHRDMTFTTSESDG-RFVLVAKFTEARLQEIRNYAVEQNITIL 236
            LR A+  +     + +++ D+  ++  S G RFVL       +L+E+   A+ QN+  L
Sbjct: 181 ILRSADDRSTASDAIANEYVDLLVSSGASTGDRFVLNVAIKPDKLRELSRSAITQNLGTL 240

Query: 237 RNRVNELGVAEPLVQRQGATRIVVELPGVQDTARAKEILGATATLEFR----EVDDKADL 292
           RNR+N LGV+EPL+Q+QG +RIVVEL GVQD A AK+++GA ATL++R    +  D   +
Sbjct: 241 RNRINALGVSEPLIQQQGDSRIVVELAGVQDPAEAKKLIGAVATLQYRPGIGQPGDTRAV 300

Query: 293 AAAAAGRAPAGSEIKFDR-NGRPVVLKKRVILGGSSITDASSSADEY-GRPQVNISLDSE 350
            AA  G  P  + + + R + RPV++ K++I+ G+ + DASS  D+  G P+V+++L++ 
Sbjct: 301 EAARTGNIPPDANLYYMRGDNRPVLVSKQIIVTGNQLVDASSGIDQQSGTPKVDVTLNAA 360

Query: 351 GGNKMSAFSKKNIGKLMATVFAEYKDSGKRSPEGKVILTK-HEEVINQATIQSALGRNFR 409
           G  KM  F+  N+GK MA ++ E     K     +V + K  E VIN ATIQS   + F+
Sbjct: 361 GAKKMGDFTNANVGKPMAVLYVEQVYETKVVDGKEVRVPKITETVINDATIQSPFSKQFQ 420

Query: 410 ITGIDSPAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLF 469
            TG+ S  EA  LALLL+ GAL AP+ IVEE  IG S+GQ NID G +A + G+  V+L 
Sbjct: 421 TTGLGSAKEASELALLLKGGALAAPMDIVEESVIGASLGQDNIDKGFKAVMLGLALVLLA 480

Query: 470 TVLYYRKFGMIANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFER 529
             +YY+ FG++A+IAL  NLV+++ VMS+I G T+T+PG+AGIVLT+GMA+DANVLI ER
Sbjct: 481 AAIYYKLFGLVADIALFFNLVVLLAVMSLI-GVTLTMPGVAGIVLTLGMAIDANVLICER 539

Query: 530 IREELREGKNPQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGIL 589
           IREELR G +P  AI  GY  A+STI DAN+T LI A+ L  +GTGAIKGF VTL IGIL
Sbjct: 540 IREELRNGSSPHAAIRAGYEKAWSTILDANVTHLIAALALTTMGTGAIKGFGVTLMIGIL 599

Query: 590 TSMFTAIVGTRCIVNLLYGGKRINKLSI 617
           TS+FT++  T      ++G +++  LS+
Sbjct: 600 TSLFTSVTLTHAFTAAIHGHRKLKTLSV 627