Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 998 a.a., protein translocase subunit SecDF from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  214 bits (544), Expect = 2e-59
 Identities = 119/289 (41%), Positives = 178/289 (61%), Gaps = 23/289 (7%)

Query: 325 GSSITDASSSADEYGRPQVNISLDSEGGNKMSAFSKKNIGKLMATVFAEYKDSGKRSPEG 384
           G  I +A    D+ GRP++ ++++  G  K +  +  N+G+ +A V   Y          
Sbjct: 404 GEVINEARQDFDQTGRPEITMNMNPTGAKKWARLTGDNVGRQVAIVLDNY---------- 453

Query: 385 KVILTKHEEVINQATIQSAL-GRNFRITGIDSPAEAHNLALLLRAGALIAPISIVEERTI 443
                    V +   +Q  + G N  I+G  +  EA +LA +L+AG + AP  IVEE  +
Sbjct: 454 ---------VYSAPVVQGEITGGNSSISGNFTIEEAQDLANILKAGKMPAPTRIVEEAIV 504

Query: 444 GPSMGQQNIDMGIQACIWGMVAVMLFTVLYYRKFGMIANIALMANLVLIIGVMSMIPGAT 503
           GPS+GQ+ I+ G+ + + G   V++F + YY + G IA+++L+ N+  I+GV++   GA 
Sbjct: 505 GPSLGQEAINQGLISTLAGFAIVVIFMIAYYSRGGFIADLSLLFNVFFILGVLAQF-GAA 563

Query: 504 MTLPGIAGIVLTVGMAVDANVLIFERIREELREGKNPQQAIHQGYANAFSTIADANITTL 563
           +TLPGIAGIVLT+GMAVDANVLIFER+REE  +G + ++ I+ GY  AFSTI DAN+TT 
Sbjct: 564 LTLPGIAGIVLTLGMAVDANVLIFERMREEAAKGLSMREVINAGYGKAFSTIFDANVTTF 623

Query: 564 ITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIVGTRCIVNLLY--GGK 610
           I   IL+  G+G +KGFA+TL IGI+TS FT++  +R  V   +  GGK
Sbjct: 624 IVGFILYFFGSGPVKGFAITLMIGIVTSFFTSVFISRLFVESTFKKGGK 672



 Score = 62.8 bits (151), Expect = 7e-14
 Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 12/168 (7%)

Query: 123 LGLDLRGGVHFLMEVDMDAAMEKLVSQQEE-AFRSDL-RDEKIRYRAIRPLSDAVEVTLR 180
           LGLDL+GG+H ++EV     ++ +    ++ +F+  L R ++++  +    +       R
Sbjct: 79  LGLDLKGGMHVVLEVSPVEIIKSMSGNSKDPSFQKALARAQELQKNSQERFTTLFAEAYR 138

Query: 181 DAEQLAQ-TKLLLESKHRDMTFTTSESDGRFVLVAKFTEARLQEIRNYAVEQNITILRNR 239
           + E   + +++   + +R      S ++     V +  EA +++    A++++  ILR R
Sbjct: 139 EVEPNGRLSRIFSNTANRGKISYESTNEQ----VIEVIEAEVED----AIDRSFNILRTR 190

Query: 240 VNELGVAEPLVQR-QGATRIVVELPGVQDTARAKEILGATATLEFREV 286
           ++  GV +P +QR +G  RI +ELPG+ +  R +++L   A LEF EV
Sbjct: 191 IDRFGVTQPNIQRLKGTGRIQIELPGIDNPDRVRKLLQGMANLEFWEV 238