Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., protein export protein SecF (NCBI) from Escherichia coli BW25113

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 30/149 (20%), Positives = 78/149 (52%), Gaps = 4/149 (2%)

Query: 443 IGPSMGQQNIDMGIQACIWGMVAVMLFTVLYYR-KFGMIANIALMANLVLIIGVMSMIPG 501
           +GPS+G      G  A +  +++++++    +  +      IAL  ++++ +G++S+   
Sbjct: 134 VGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFH- 192

Query: 502 ATMTLPGIAGIVLTVGMAVDANVLIFERIREELREGKN--PQQAIHQGYANAFSTIADAN 559
             + L  +A ++  +G +++ ++++ +RIRE  R+ +   P +  +             +
Sbjct: 193 IEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITS 252

Query: 560 ITTLITAIILFAVGTGAIKGFAVTLSIGI 588
            TTL+  ++L+  G   ++GF++T+ IG+
Sbjct: 253 GTTLMVILMLYLFGGPVLEGFSLTMLIGV 281