Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., protein translocase subunit SecD from Erwinia amylovora T8

 Score =  746 bits (1927), Expect = 0.0
 Identities = 380/607 (62%), Positives = 475/607 (78%), Gaps = 4/607 (0%)

Query: 12  MVMLTIAVAALYALPNIYGEDPAIQITGARGASVDMSTLDAVTDALNKAQLSQKSIALEN 71
           M+++ + V  LYALPN+YGEDPA+Q+TGARG++    TL  +  AL +  +  KS+ALE 
Sbjct: 1   MLIVVLLVGLLYALPNLYGEDPAVQVTGARGSAASEQTLVQIQSALKQDNIQSKSVALEK 60

Query: 72  GSILVRFNDTDTQISARDIISEALGKDKIVALNLAPSTPYWLESIGAAPMKLGLDLRGGV 131
           G+IL RF +TD Q+ AR+ I + LG D +VALNLAP+TP WL ++ A PMKLGLDLRGGV
Sbjct: 61  GAILARFANTDVQLRAREAIIKVLGDDYVVALNLAPATPAWLATLSAEPMKLGLDLRGGV 120

Query: 132 HFLMEVDMDAAMEKLVSQQEEAFRSDLRDEKIRYRAIRPLSD-AVEVTLRDAEQLAQTKL 190
           HFLMEVDMD A+ KL  Q  +  RSDLR++ + Y  +R   +  +E+  RD +   +   
Sbjct: 121 HFLMEVDMDTALGKLQDQNIDNLRSDLREKSVPYVNVRKTGNYGLEIRFRDDKTRDEAVS 180

Query: 191 LLESKHRDMTFTTSESDGRFVLVAKFTEARLQEIRNYAVEQNITILRNRVNELGVAEPLV 250
            L ++HRDM   +S S+    L A  ++ R++E R YAV+QNI ILRNRVN+LGVAEPLV
Sbjct: 181 YLTTRHRDMVINSSGSNA---LTAVMSDERMREAREYAVQQNINILRNRVNQLGVAEPLV 237

Query: 251 QRQGATRIVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAAAGRAPAGSEIKFDR 310
           QRQGA RIVVELPG+QDTARAKEILGATATLEFR V+   D  AAA GR P  SE+K  R
Sbjct: 238 QRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTSVDATAAANGRVPGDSEVKDTR 297

Query: 311 NGRPVVLKKRVILGGSSITDASSSADEYGRPQVNISLDSEGGNKMSAFSKKNIGKLMATV 370
            G+PVVL KRVIL G  ITD++SS DEY +PQVNISLDS GGN MS F+K ++GK MAT+
Sbjct: 298 EGQPVVLYKRVILTGDHITDSTSSNDEYNQPQVNISLDSAGGNIMSNFTKDSVGKAMATL 357

Query: 371 FAEYKDSGKRSPEGKVILTKHEEVINQATIQSALGRNFRITGIDSPAEAHNLALLLRAGA 430
           F EYKDSGK+   G+ IL KHEEVIN A IQS LG +FRITGI++P EA  L+LLLRAGA
Sbjct: 358 FVEYKDSGKKDANGRAILEKHEEVINVANIQSRLGNSFRITGINNPNEARQLSLLLRAGA 417

Query: 431 LIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTVLYYRKFGMIANIALMANLV 490
           LIAPI IVEERTIGP+MG QNI  G++AC+WG++A ++F V++Y+KFG++A  AL+ANLV
Sbjct: 418 LIAPIQIVEERTIGPTMGAQNITQGLEACLWGLIASIVFMVVWYKKFGLVATSALLANLV 477

Query: 491 LIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELREGKNPQQAIHQGYAN 550
           LI+G+MS++PGAT+T+PGIAGIVLT+ +AVDANVLI ERI+EELR G++ QQAIH+GY  
Sbjct: 478 LIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRSVQQAIHEGYKG 537

Query: 551 AFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIVGTRCIVNLLYGGK 610
           AFS+I DAN+TTLI  IIL+AVGTG+IKGFA+T +IG+ TSMFTAI+GTR IVNL+YGGK
Sbjct: 538 AFSSIVDANVTTLIKVIILYAVGTGSIKGFAITTAIGVATSMFTAIIGTRAIVNLMYGGK 597

Query: 611 RINKLSI 617
           RINKLSI
Sbjct: 598 RINKLSI 604