Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., protein-export membrane protein, SecD/SecF family from Enterobacter asburiae PDN3

 Score =  736 bits (1901), Expect = 0.0
 Identities = 386/607 (63%), Positives = 468/607 (77%), Gaps = 4/607 (0%)

Query: 12  MVMLTIAVAALYALPNIYGEDPAIQITGARGASVDMSTLDAVTDALNKAQLSQKSIALEN 71
           M+++ I V  LYALPN+YGEDPA+QITGARG +    TL  V   L + +++ KS+ALE 
Sbjct: 1   MLVVVILVGLLYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEE 60

Query: 72  GSILVRFNDTDTQISARDIISEALGKDKIVALNLAPSTPYWLESIGAAPMKLGLDLRGGV 131
           G+IL RF+ TDTQ+ AR+ +   LG   +VALNLAP+TP WL ++ A PMKLGLDLRGGV
Sbjct: 61  GAILARFDTTDTQLRAREALMGVLGDKYVVALNLAPATPRWLAAMKAEPMKLGLDLRGGV 120

Query: 132 HFLMEVDMDAAMEKLVSQQEEAFRSDLRDEKIRYRAIRPLSD-AVEVTLRDAEQLAQTKL 190
           HFLMEVDMD A+ KL  Q  ++ RSDLRD+ I Y  +R   +  + +T RD+    Q   
Sbjct: 121 HFLMEVDMDTALGKLQEQNIDSLRSDLRDKGIAYTTVRKEDNYGMSITFRDSAARDQAVD 180

Query: 191 LLESKHRDMTFTTSESDGRFVLVAKFTEARLQEIRNYAVEQNITILRNRVNELGVAEPLV 250
            L  +HRD+  T   S G   L A  T+ARL+E R YAV+QNI ILRNRVN+LGVAEPLV
Sbjct: 181 YLTQRHRDLVIT---SQGSNQLRAVMTDARLKEAREYAVQQNINILRNRVNQLGVAEPLV 237

Query: 251 QRQGATRIVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAAAGRAPAGSEIKFDR 310
           QRQGA RIVVELPG+QDTARAKEILGATATLEFR V+   D +AAAAGR P  SE+K  R
Sbjct: 238 QRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDQSAAAAGRIPGDSEVKQTR 297

Query: 311 NGRPVVLKKRVILGGSSITDASSSADEYGRPQVNISLDSEGGNKMSAFSKKNIGKLMATV 370
            G+PVVL KRVIL G  ITD++SS DEY +PQVNISLDS GGN MS F+K NIGK MAT+
Sbjct: 298 EGQPVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATL 357

Query: 371 FAEYKDSGKRSPEGKVILTKHEEVINQATIQSALGRNFRITGIDSPAEAHNLALLLRAGA 430
           F EYKDSGK+   G+ +L K EEVIN A IQS LG +FRITGI++P EA  L+LLLRAGA
Sbjct: 358 FVEYKDSGKKDANGRAVLVKEEEVINIANIQSRLGNSFRITGINNPNEARQLSLLLRAGA 417

Query: 431 LIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTVLYYRKFGMIANIALMANLV 490
           LIAPI IVEERTIGP++G QNI  G++AC+ G+V  +LF + +Y+KFG+IA  AL+ANLV
Sbjct: 418 LIAPIQIVEERTIGPTLGMQNIQQGLEACLAGLVVSILFMIFFYKKFGLIATSALIANLV 477

Query: 491 LIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELREGKNPQQAIHQGYAN 550
           LIIG+MS++PGAT+T+PGIAGIVLT+ +AVDANVLI ERI+EEL  G++ QQAI +GY  
Sbjct: 478 LIIGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSIQQAIDEGYKG 537

Query: 551 AFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIVGTRCIVNLLYGGK 610
           AFS+I DAN+TTLI  +IL+AVGTGAIKGFA+T  IG+ TSMFTAIVGTR IVNLLYGGK
Sbjct: 538 AFSSIFDANVTTLIKVLILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGK 597

Query: 611 RINKLSI 617
           R+ KLSI
Sbjct: 598 RVKKLSI 604