Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., protein translocase subunit SecD from Dickeya dianthicola ME23

 Score =  754 bits (1947), Expect = 0.0
 Identities = 388/618 (62%), Positives = 476/618 (77%), Gaps = 4/618 (0%)

Query: 1   MLNRYPLWKYLMVMLTIAVAALYALPNIYGEDPAIQITGARGASVDMSTLDAVTDALNKA 60
           MLNRYPLWKYLM+++TI V  LYALPN+YGEDPAIQ+TGARG +   STL  + + L + 
Sbjct: 1   MLNRYPLWKYLMLIVTIVVGLLYALPNLYGEDPAIQVTGARGTAASESTLVQIQNVLKEQ 60

Query: 61  QLSQKSIALENGSILVRFNDTDTQISARDIISEALGKDKIVALNLAPSTPYWLESIGAAP 120
            ++ KSIALENG+IL RF+ +D Q+ AR+++  ALG+  +VALNLAP+TP WL  +GA P
Sbjct: 61  NIASKSIALENGAILARFSTSDVQLRAREVLLNALGEKFVVALNLAPATPTWLRMLGAEP 120

Query: 121 MKLGLDLRGGVHFLMEVDMDAAMEKLVSQQEEAFRSDLRDEKIRYRAIRPLSD-AVEVTL 179
           MKLGLDLRGGVHFLMEVDMD A+ KL  Q  ++ RSDLR++ I+Y ++R   +  V++  
Sbjct: 121 MKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDSLRSDLREKGIQYASVRKSDNYGVDILF 180

Query: 180 RDAEQLAQTKLLLESKHRDMTFTTSESDGRFVLVAKFTEARLQEIRNYAVEQNITILRNR 239
           RD +        L  +HRD+   +S SD    L A  ++ARL E R YAV+QNI ILRNR
Sbjct: 181 RDGQLRDDAVNYLAPRHRDLVLNSSGSD---TLRAVMSDARLGEAREYAVQQNINILRNR 237

Query: 240 VNELGVAEPLVQRQGATRIVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAAAGR 299
           VN+LGVAEPLVQRQGA RIVVELPG+QDTARAKEILGATATLEFR V+   D  A   GR
Sbjct: 238 VNQLGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDPVALTNGR 297

Query: 300 APAGSEIKFDRNGRPVVLKKRVILGGSSITDASSSADEYGRPQVNISLDSEGGNKMSAFS 359
            P  +E+   R+G PV L KRVIL G  ITD++S  DEY RPQVNISLDS GGN MS F+
Sbjct: 298 VPGDTEVMNMRDGGPVALYKRVILTGDHITDSTSGNDEYNRPQVNISLDSAGGNMMSNFT 357

Query: 360 KKNIGKLMATVFAEYKDSGKRSPEGKVILTKHEEVINQATIQSALGRNFRITGIDSPAEA 419
           K NIGK MAT+F EYKDSGK+   G+ +L K EEVIN ATIQS LG +FRITGI++P EA
Sbjct: 358 KDNIGKPMATLFVEYKDSGKKDANGRAVLEKQEEVINVATIQSRLGNSFRITGINNPNEA 417

Query: 420 HNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTVLYYRKFGM 479
             L+LLLRAGALIAPI IVEERTIGP++G QNI  G++AC+ G+   +LF + +Y+KFGM
Sbjct: 418 RQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLAGLAVSILFMIFFYKKFGM 477

Query: 480 IANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELREGKN 539
           IA  AL+ NLVL++G+MS++PGAT+T+PGIAGIVLT+ +AVDANVLI ERI+EEL  G+ 
Sbjct: 478 IATSALLLNLVLVVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRT 537

Query: 540 PQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIVGT 599
            QQAI +GY  AFS+I DAN+TTLI  +IL+A+GTG+IKGFA+T  IG+ TSMFTAIVGT
Sbjct: 538 VQQAIDEGYRGAFSSIFDANVTTLIKVLILYAIGTGSIKGFAITTGIGVATSMFTAIVGT 597

Query: 600 RCIVNLLYGGKRINKLSI 617
           R IVNLLYGGKRI KLSI
Sbjct: 598 RAIVNLLYGGKRIKKLSI 615