Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., bifunctional preprotein translocase subunit SecD/SecF from Alteromonas macleodii MIT1002

 Score =  285 bits (729), Expect = 6e-81
 Identities = 185/538 (34%), Positives = 287/538 (53%), Gaps = 70/538 (13%)

Query: 100 IVALNLAPSTPYWLESIGAAPMKLGLDLRGGVHFLMEVDMDAAMEKLVSQQEEAFRSDLR 159
           I+  ++    P W  +   + + LGLDL+GG H L+  D +A  EK ++       S+LR
Sbjct: 26  ILPQSIKQQLPTWYTT---STLSLGLDLQGGSHLLLAADTNALFEKQLNSFSSDLLSELR 82

Query: 160 DEKIRYRAIR-------PLSDAVEVTLRDAEQLAQTK---------------LLLESKHR 197
            + +RY             S +V  TLR A+   + K               L +E K  
Sbjct: 83  SQNVRYTKTSHSLTHKDSRSGSVVFTLRSADDARKVKDTAYQISAQPNGSSALDVEIKQS 142

Query: 198 DMTFTTSESDGRFVLVAKFTEARLQEIRNYAVEQNITILRNRVNELGVAEPLVQRQGATR 257
            +T T +E          +TE  +++  + +VE    ++R R+NE G+ EP V  QG   
Sbjct: 143 TVTLTLNEL---------YTEQLVKDTLSRSVE----VVRKRLNETGLTEPSVTLQGKDA 189

Query: 258 IVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAAAGRAPAGSEIKFDRNGRPVVL 317
           I+V++PG+ D  + K++LG TA + F            AA         K D  G    L
Sbjct: 190 ILVQMPGMSDPTQVKKLLGTTAQMTFHW----------AANSQSEQVMNKQDAAGNTYRL 239

Query: 318 KKRVILGGSSITDASSS-ADEYGRPQVNISLDSEGGNKMSAFSKKNIGKLMATVFAEYKD 376
           +++V L G  ITDA+   + E G+P V   LDS G  + +  ++ NIG+++A V      
Sbjct: 240 EQKVALEGEHITDAAGVLSSENGQPVVTFRLDSAGAKQFATMTRDNIGRVLAIVL----- 294

Query: 377 SGKRSPEGKVILTKHEEVINQATIQSAL-GRNFRITGIDSPAEAHNLALLLRAGALIAPI 435
                          ++V+    I S + G    ITG  +  EA N AL+LR GAL  P+
Sbjct: 295 --------------DDKVVTAPVINSVIPGGRGEITGNFTLPEAGNTALMLRTGALPVPL 340

Query: 436 SIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTVLYYRKFGMIANIALMANLVLIIGV 495
           +I+EERT+GP +G   I  G+++ + G + V+ F V  Y ++G IA+ AL  N+ L+ G 
Sbjct: 341 TIIEERTVGPDLGSDAIQTGVESGVAGALLVLAFMVAIYGRWGAIASFALCINMALVFGA 400

Query: 496 MSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELREGKNPQQAIHQGYANAFSTI 555
           +++  GAT+TLPGIAG++LT+GMAVDAN+LI ERIREE ++G+    AI  G+  AF+TI
Sbjct: 401 LTLF-GATLTLPGIAGLILTMGMAVDANILINERIREESKKGRPAASAIEVGFDKAFATI 459

Query: 556 ADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIVGTRCIVNLLYGGKRIN 613
            D+N TTLI   +LF  G+G IKGFA+T+++G+++S+FTA+  T+ ++  +   K  N
Sbjct: 460 VDSNFTTLIAVSLLFMFGSGPIKGFAITIALGLVSSVFTAVALTKMLMLRVVKSKHKN 517