Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., Protein translocase subunit SecD from Acinetobacter radioresistens SK82

 Score =  541 bits (1393), Expect = e-158
 Identities = 299/634 (47%), Positives = 415/634 (65%), Gaps = 22/634 (3%)

Query: 4   RYPLWKYLMVMLTIAVAALYALPNIYGEDPAIQITGAR-GASVDMSTLDAVTDALNKAQL 62
           RYP WKYL++++ + ++ LYALP++Y ++PA+QI+GA+ G  +D S +      L +A +
Sbjct: 2   RYPAWKYLLILVVLVISTLYALPSLYPDEPAVQISGAKAGTQIDQSVIQKAEQILKEANI 61

Query: 63  SQKSIALENGSILVRFNDTDTQISARDIISEALGKDKIVALNLAPSTPYWLESIGAAPMK 122
                   N + L+R + TD Q+ A+D++  ALG++ +VALNLAP+TP WL+ IGA PMK
Sbjct: 62  PSHDNTFTNNAALLRVDSTDAQLKAKDVLRRALGEEYVVALNLAPTTPEWLQKIGAKPMK 121

Query: 123 LGLDLRGGVHFLMEVDMDAAMEKLVSQQEEAFRSDLRDEKIRYRAIRPLSDAVEVTLRDA 182
           LGLDLRGGVHFL+EVDMD A+ + +       R  LR+  +++ ++   ++ + +     
Sbjct: 122 LGLDLRGGVHFLLEVDMDKALSQRMETSATDLRRQLRENNLKFNSLTLNNNQINLQFAQN 181

Query: 183 EQLAQTKLLLESKHRDMTFTTSESDGRFVLVAKFTEARLQEIRNYAVEQNITILRNRVNE 242
           +        L     + T     S    +L   +T+AR QEI++YAV QN+T LRNR+NE
Sbjct: 182 DDREAVMDFLRRNGNEFTQQALASSTGPMLRLTYTDARRQEIQSYAVNQNLTTLRNRINE 241

Query: 243 LGVAEPLVQRQGATRIVVELPGVQDTARAKEILGATATLEFREVDDKAD------LAAAA 296
           LGVAE LVQ QG+ RIVV+LPGVQDTA AK +LG TA LEFR V D  D         + 
Sbjct: 242 LGVAEALVQTQGSNRIVVDLPGVQDTAEAKRVLGRTANLEFRLVSDLNDQYIDPYTGKSN 301

Query: 297 AGRAPAGSEI----KFDRNGRPVVLKKRVILGGSSITDASSS-ADEYGRPQVNISLDSEG 351
               P G+E+      D +GR ++L++  IL G  + +ASS  + + G  +VNI+LDS G
Sbjct: 302 GQPLPPGTELFAYESLD-SGRQLLLQRNRILTGERVQNASSGFSQDTGGAEVNITLDSAG 360

Query: 352 GNKMSAFSKKNIGKLMATVFAEYKD-----SGKRSPEGKVILTKHEE--VINQATIQSAL 404
           G  M+  ++  +GK MA +F E K      +   +     + T + E  VIN ATIQ+ L
Sbjct: 361 GKLMADATRNAVGKRMAVLFIENKQRISYVTDPVTGTQTEVRTPYAESVVINAATIQAVL 420

Query: 405 GRNFRITGIDSPAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACIWGMV 464
           G  FRITG+DSP EA  LAL+LRAGAL AP+  VEER +GPS+GQ+NID G+ +   G +
Sbjct: 421 GSQFRITGLDSPQEASELALMLRAGALAAPMYFVEERVVGPSLGQENIDKGVLSTQIGFL 480

Query: 465 AVMLFTVLYYRKFGMIANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANV 524
            V ++ V+++R FG+IAN AL+ NL + + +MS I GA +TLPGIAGIV+T+GMAVDANV
Sbjct: 481 LVAIWMVVFFRLFGLIANFALVFNLAMTLSIMSWI-GAALTLPGIAGIVITIGMAVDANV 539

Query: 525 LIFERIREELREGKNPQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTL 584
           LI ERIREE++ G +P+QAI  GY  A++TI D+N+TT + A ILFA+GTG IKGFAVTL
Sbjct: 540 LICERIREEMKWGASPKQAIVAGYDRAYNTIFDSNLTTFLVAFILFAIGTGPIKGFAVTL 599

Query: 585 SIGILTSMFTAIVGTRCIVNLLYGGKR-INKLSI 617
            IGI  SMFTAI  TR IV ++YG +R + KLSI
Sbjct: 600 MIGIACSMFTAITVTRAIVQIIYGKRRNLKKLSI 633