Pairwise Alignments

Query, 301 a.a., hydrogen peroxide-inducible genes activator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 12/282 (4%)

Query: 6   SLKQLSYLVTLYETRHFSEAAERCFVSQSTLSKGIQNLEELIGCSLYEKQDKKSPLVFTR 65
           +L+ L   V +     FS+AAE   ++QS++SK ++ LE+ +G  L  +   ++ L  T 
Sbjct: 2   NLRTLRAFVEVVRQGGFSQAAEVVSLTQSSVSKAVKTLEDELGTPLLNRLGHRNEL--TA 59

Query: 66  VGELVVKQGRELLAKGQDLVELGKLCQGDTMEGQLRLGCIPTIAPFLLCDLVQEINQRYP 125
            GE+  ++   LLA+  DLV      +G    G LR+G  P     L   +      RYP
Sbjct: 60  AGEIAYRRALVLLAERNDLVAEINDLRG-LKRGVLRIGLPPVGCGVLFATMFATYRSRYP 118

Query: 126 KLHLLLREDTTANLLSALRSGELDVLILALPVDIGNMESYVVGQDPFRMVISRNQVNQIR 185
            + + L E  +  L   L +GE+D+  L LPVD  + +   V  +P   V+  +      
Sbjct: 119 DIDIELTEYGSKKLRECLEAGEVDLAALLLPVD-EDFDYQPVRNEPLMAVLPMSHPLAHL 177

Query: 186 VPIRYADLPDESVFLLENEHCLTEHAVSACKLTDKEKINP-FTATS--LHTLVQMVANGL 242
             I +  L D    L E    L    ++AC   +++ + P  TA S  +  ++ +VA GL
Sbjct: 178 KRIDFTHLADSPFILFEAGFALNAKILAAC---ERKGVTPKVTARSGQIDFIIDLVAAGL 234

Query: 243 GTTFIPQMAIDHGLLDNQNLVVIDPPGQKAYREIGLVWRPSS 284
           G  F+P+M           L+ +D P    +  I L WR S+
Sbjct: 235 GVAFVPRMLAYKHQHAGIALIPLDEPHTDWH--IALAWRTSA 274