Pairwise Alignments

Query, 301 a.a., hydrogen peroxide-inducible genes activator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., DNA-binding transcriptional regulator OxyR from Erwinia tracheiphila SCR3

 Score =  166 bits (420), Expect = 6e-46
 Identities = 104/294 (35%), Positives = 159/294 (54%), Gaps = 4/294 (1%)

Query: 6   SLKQLSYLVTLYETRHFSEAAERCFVSQSTLSKGIQNLEELIGCSLYEKQDKKSPLVFTR 65
           +++ L YLV+L E RHF  AA+ C VSQ TLS  I+ LE+ +G  L E+  +K  ++FT+
Sbjct: 2   NIRDLEYLVSLAEYRHFRRAADACHVSQPTLSGQIRKLEDELGVMLLERTSRK--VLFTQ 59

Query: 66  VGELVVKQGRELLAKGQDLVELGKLCQGDTMEGQLRLGCIPTIAPFLLCDLVQEINQRYP 125
            G L+V Q R +L + + L E+    QG+ M G L +G IPT+ P+LL  +V  +++ +P
Sbjct: 60  AGLLLVDQARTILREVKVLKEMASQ-QGEVMSGPLHIGLIPTVGPYLLPQIVPMLHKTFP 118

Query: 126 KLHLLLREDTTANLLSALRSGELDVLILALPVDIGNMESYVVGQDPFRMVISRNQVNQIR 185
           +L + L E  T  LL+ L SG+LD  ILAL  +        +  +P R+ I ++     R
Sbjct: 119 RLEMYLHEAQTLQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMRLAIYQDHPWHKR 178

Query: 186 VPIRYADLPDESVFLLENEHCLTEHAVSACKLTDKEKINPFTATSLHTLVQMVANGLGTT 245
             +  +DL  E + +LE+ HCL +  +  C     ++   F ATSL TL  MVA G G T
Sbjct: 179 DRVPMSDLAGEKLLMLEDGHCLRDQTMGFCFQAGADEDTHFRATSLETLRNMVAAGSGIT 238

Query: 246 FIPQMAIDHGLLDNQNLVVIDPPGQKAYREIGLVWRPSSSRIHTFRQLAEIVAE 299
            +P +A+    L    +  +     +  R I LV+RP S     + QL E + E
Sbjct: 239 LLPALAVPKERL-RDGVCYLPCYKPEPQRTIALVYRPGSPLRSRYEQLTETIRE 291