Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., recombinase RdgC from Pseudomonas simiae WCS417

 Score =  244 bits (624), Expect = 1e-69
 Identities = 122/304 (40%), Positives = 196/304 (64%), Gaps = 1/304 (0%)

Query: 1   MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDM-MTHVS 59
           MWFKN ++YR+ +++  +A+ LE  +A     PC SQ+   +G+V+  GK  D  + HVS
Sbjct: 1   MWFKNLLIYRLTQDLPVDAEALEAAMATKLARPCASQELTTYGFVAPFGKGEDAPLVHVS 60

Query: 60  ENRILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPRAF 119
            + +L+ A++EE++LP SV++D+L  KVEE+EAE+ R + KKE+D +K++I+   LPRAF
Sbjct: 61  GDFLLIAARKEERILPGSVVRDALKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAF 120

Query: 120 SKSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQWV 179
            +   TF  I P +GLILV++ S K+AED+LS LR+ +G+LPV P   + A    +T WV
Sbjct: 121 IRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGTLPVRPLTVKTAPTAIMTDWV 180

Query: 180 KDGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRI 239
                   F +++E EL+   +DG  +RCK+Q+L+ +EI  H+   KVVT+L++ WQD++
Sbjct: 181 TTQKPADDFFVLDECELRDTHEDGGIVRCKRQDLTGEEIQLHLTTGKVVTQLSLAWQDKL 240

Query: 240 RFVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGL 299
            F+L +  ++KRL + D L++Q +    ++   +LDA F+L+      F+P L  ALGG 
Sbjct: 241 SFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFIPALVEALGGE 300

Query: 300 PHPE 303
             P+
Sbjct: 301 ETPQ 304