Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., DNA recombination-dependent growth factor C from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  162 bits (411), Expect = 8e-45
 Identities = 97/300 (32%), Positives = 157/300 (52%), Gaps = 9/300 (3%)

Query: 3   FKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGK-HGDMMTHVSEN 61
           FKN  +YR+        + +E  L   RF PCG+   +  GW+   G+ HG ++  V+  
Sbjct: 2   FKNVTIYRIAPGWEATLEDMEAALDAARFVPCGASQDKSVGWIEPRGEAHGPLVESVAGQ 61

Query: 62  RILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPRAFSK 121
           RIL   + E K +P SV+K     + + +EA  GR   KKE  AL+ED ++ LLP+AF++
Sbjct: 62  RILK-LQIETKGVPGSVVKKKAQEEADHIEATTGRKPGKKETKALREDALLALLPQAFAR 120

Query: 122 SQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQWVK- 180
               +V I    G ++ DA S  K ++V++ L +    L V      +  +T +TQW+  
Sbjct: 121 QMTVWVWIDLQNGWLVTDASSQGKLDEVVTALVRAFDGLAVTLLQTAVTPQTAMTQWLSA 180

Query: 181 --DGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDR 238
                 P GF++  E ELKS  ++ + ++  +  L++DE+  HI   K+ T+LA++W+ R
Sbjct: 181 TTPDEWPGGFAVERECELKSGDEEKSAVKFTRHNLATDEVRKHITEGKLPTRLAMSWEGR 240

Query: 239 IRFVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGG 298
           I F L E   +K++ +   L+   D  P E      D D +L  GE+   +P+L  ALGG
Sbjct: 241 IGFTLTESLQVKKINF---LEGVFDGRPEEGENG-FDTDVALSTGELQKLIPELIEALGG 296