Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Recombination-associated protein RdgC from Alteromonas macleodii MIT1002

 Score =  228 bits (581), Expect = 1e-64
 Identities = 124/299 (41%), Positives = 184/299 (61%), Gaps = 6/299 (2%)

Query: 1   MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSAL---GKHGDMMTH 57
           MWFKN   Y++ + ++ +   LE+ L E  F PCGSQD    G+ S     GK G M  H
Sbjct: 1   MWFKNVKAYQITQPLSLDEGDLERALNEHAFRPCGSQDLATMGFASPFSQAGKQGTMF-H 59

Query: 58  VSENRILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPR 117
           V + R  +  K++EK+LP +V+   L+  V ++E E G P+ KK K  LK++I   LLP+
Sbjct: 60  VVQQRFWITLKKQEKILPGAVVNAELDEMVAKIEMETGSPVGKKAKADLKQEIQTRLLPQ 119

Query: 118 AFSKSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQ 177
           AF+K+  T   I   + L++VDA S  KAE  L+++RK +GSLPVVP     ++++ LT 
Sbjct: 120 AFTKNTYTHGFISLADNLVVVDASSDGKAEAFLAMVRKAIGSLPVVP-FTRRSLQSELTH 178

Query: 178 WVKDGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQD 237
           WV +   P+G  L+EEAELKS  D G+ IRCK Q L S+EI  H+ A K+V K+A  + +
Sbjct: 179 WVTEST-PEGVGLLEEAELKSTDDTGSVIRCKNQPLDSEEISIHLDAGKLVQKVAFEYAE 237

Query: 238 RIRFVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNAL 296
            +  ++ ED +IKR+ ++D +KE+ DD+P +   ARLDA+F+L+  E+   L  L  AL
Sbjct: 238 TLTAIMCEDGAIKRVKFTDRIKEETDDVPKDQVEARLDAEFALMSAEICTLLNFLRGAL 296