Pairwise Alignments

Query, 466 a.a., U32 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., 23S rRNA 5-hydroxycytidine synthase from Pseudomonas lactucae CFBP13502

 Score =  130 bits (326), Expect = 2e-34
 Identities = 120/456 (26%), Positives = 196/456 (42%), Gaps = 84/456 (18%)

Query: 1   MTTPKTFVPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNH-ENLQIGINE 59
           M+ PK  + ELLSPA  +   R A  +GADA+Y G P +    R+N  N   ++   +  
Sbjct: 1   MSLPKHHL-ELLSPARDVAIAREAILHGADAIYIGGPSFG--ARHNACNEVSDIAQLVEF 57

Query: 60  AHALGKKFYVVCNIQPHNSKLKTFIRDLKPVIDMGPDALIMSDPGLIMMVREEFPHMPIH 119
           A     + +   N   H+++L+   + +  + D G DALI+ D G++ +   + P + +H
Sbjct: 58  ARRYHVRVFTTINTILHDNELEPARKLIHQLYDAGVDALIVQDLGVMEL---DIPPIELH 114

Query: 120 LSVQANAVNWATVKFWASQGVERVIVSRELSLEEIEEIREKCPNTEIEVFVHGALCMAYS 179
            S Q +       KF    G  +++++REL+L+EI  I ++  +  IE F+HGALC+A+S
Sbjct: 115 ASTQTDIRTLGRAKFLDQAGFSQLVLARELNLQEIRAIADET-DAAIEFFIHGALCVAFS 173

Query: 180 GRCLLSGYINKRDPNQGTCTNACRWEYKVEAAKEDEAGQIVEQFDPNAAQAIEVQNERPD 239
           G+C +S   N R  N+G C+ ACR  Y +    +D+ G++V                   
Sbjct: 174 GQCNISHAQNGRSANRGDCSQACRLPYTL----KDDQGRVV------------------- 210

Query: 240 TTIGAGKPIDDVVLLSESHRPDEKMAAFEDEHGTYIMNSKDLRAVQHVERLTQMGVHSLK 299
                                     AFE     ++++ KD     ++  L + GV S K
Sbjct: 211 --------------------------AFE----KHLLSMKDNNQSANLRALVEAGVRSFK 240

Query: 300 IEGRTKSFYYCARTAQVYRKAIDDAVAGKPFDDSLMTTLESLAHRGYTEGFLRRHTHDAY 359
           IEGR K   Y       YR+ +D+ +  +P          + A  G T  F        +
Sbjct: 241 IEGRYKDMGYVKNITAYYRQRLDEILEDRPD--------LARASSGRTAHFFLPDPEKTF 292

Query: 360 QNYDYGYSVSDTQQFVG-----EFTGKRRGAMAEVEVKNKFVL-------GDSLELMTPK 407
                 Y VSD +  +G      FTG   G + +   ++  V+       GD L ++  +
Sbjct: 293 HRGSTDYFVSDRKIDIGAFDTPTFTGLPVGTVEKAGKRDLQVVTHEPLSNGDGLNVLIKR 352

Query: 408 GNVIFTLEAMENRKGEATDDAKGNGHFVYIPVPEEL 443
             V F     E  KGE  +D  G   + Y   P E+
Sbjct: 353 EVVGFRANIAE-PKGEFEED--GQKRYRYRVEPNEM 385