Pairwise Alignments

Query, 466 a.a., U32 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., putative collagenase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  129 bits (325), Expect = 2e-34
 Identities = 108/421 (25%), Positives = 175/421 (41%), Gaps = 78/421 (18%)

Query: 10  ELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAHALGKKFYV 69
           ELLSPA      R A  +GADAVY G P +  R  N   +  ++   +  AH  G + +V
Sbjct: 9   ELLSPARDAAIAREAILHGADAVYIGGPGFGAR-HNASNSLRDIADLVPFAHRYGARIFV 67

Query: 70  VCNIQPHNSKLKTFIRDLKPVIDMGPDALIMSDPGLIMMVREEFPHMPIHLSVQANAVNW 129
             N   H+ +L+   R +  + + G DALI+ D G++ +   + P + +H S Q +  + 
Sbjct: 68  TLNTILHDDELEPAQRLITDLYNTGVDALIVQDMGILEL---DIPPIELHASTQCDIRSV 124

Query: 130 ATVKFWASQGVERVIVSRELSLEEIEEIREKCPNTEIEVFVHGALCMAYSGRCLLSGYIN 189
              KF A  G  +++++REL+L +I  I +    T IE F+HGALC+AYSG+C +S    
Sbjct: 125 EKAKFLADVGFSQIVLARELNLSQIAAIHQATDAT-IEFFIHGALCVAYSGQCYISHAQT 183

Query: 190 KRDPNQGTCTNACRWEYKVEAAKEDEAGQIVEQFDPNAAQAIEVQNERPDTTIGAGKPID 249
            R  N+G C+ ACR  Y +    +D+ G++V                             
Sbjct: 184 GRSANRGDCSQACRLPYTL----KDDQGRVV----------------------------- 210

Query: 250 DVVLLSESHRPDEKMAAFEDEHGTYIMNSKDLRAVQHVERLTQMGVHSLKIEGRTKSFYY 309
                                +  ++++ KD     ++  L   GV S KIEGR K   Y
Sbjct: 211 --------------------SYEKHLLSMKDNDQTANLGALIDAGVRSFKIEGRYKDMSY 250

Query: 310 CARTAQVYRKAIDDAVAGK---------PFDDSLMTTLESLAHRGYTEGFLRRHTHDAYQ 360
                  YR+ +D  +  +           +   + + E   HRG T+ F+     D   
Sbjct: 251 VKNITAHYRQMLDAIIEQRGDLARASVGRTEHFFVPSTEKTFHRGSTDYFVNARKGD--- 307

Query: 361 NYDYGYSVSDTQQFVGEFTGKRRGA---MAEVEVKNKFVLGDSLELMTPKGNVIFTLEAM 417
                    D+ +F+G   G+         +VE       GD L ++  +  V F    +
Sbjct: 308 -----IGAFDSPKFIGLPVGEVLNVAKDYLDVEATEPLANGDGLNVLIKREVVGFRANTV 362

Query: 418 E 418
           E
Sbjct: 363 E 363