Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 865 a.a., ATP-dependent chaperone ClpB from Rhodanobacter sp000427505 FW510-R12

 Score = 1176 bits (3043), Expect = 0.0
 Identities = 597/856 (69%), Positives = 707/856 (82%), Gaps = 7/856 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR+D+ TS+FQ A++DAQSLA+GRDH  +EPVH+M ALL Q G    PLLT   V+V  L
Sbjct: 1   MRMDKLTSRFQQALADAQSLAVGRDHNMLEPVHVMAALLGQQGGSTAPLLTQAQVNVPLL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
             ++ ++L+RLPKVSG  G++ L + L  L NL DK+AQ+R D +I+SE+++LAA+EDKG
Sbjct: 61  TQRVNDLLERLPKVSGQEGNINLGNDLNRLLNLTDKLAQQRGDQFIASELFVLAALEDKG 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            LG  LK  G T+  +  AIE++RGG+KV   NAEE RQALEK+ IDLT RAE GKLDPV
Sbjct: 121 ELGAALKAAGATKANLEAAIEQLRGGEKVQSENAEEQRQALEKYCIDLTARAESGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRD+EIRRTIQVLQRRTKNNPV+IGEPGVGKTAIVEGLAQRII  EVPEGLR RRVL+L
Sbjct: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLAL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGAL+AGAK+RGEFEERLK+VLN+LAK EG IILFIDELHTMVGAGK EGSMDAGNMLK
Sbjct: 241 DMGALIAGAKFRGEFEERLKAVLNDLAKNEGQIILFIDELHTMVGAGKAEGSMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHC+GATTLDEYR+YIEKD ALERRFQKV V EP+VEDTIAILRGLKERY +H
Sbjct: 301 PALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H VEITDPAIVAAA+LSHRYI+DRQLPDKAIDL+DEAAS IRM+IDSKPE LD+LER++I
Sbjct: 361 HGVEITDPAIVAAATLSHRYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLKI+++ L  E D  S++RLA L  ++ + ER++++L E+WK+EKAAL GT  +K  +E
Sbjct: 421 QLKIQREMLKKEKDSESKQRLADLETDIGKLEREFSDLNEIWKSEKAALQGTTRVKEQIE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           QAR +L+ A+R  D  +MSE+QYG++P LEKQL  A  AE Q+  L++ +VT  EIAEV+
Sbjct: 481 QARQELDAAQRRQDYAKMSEIQYGKLPALEKQLAAAQAAETQDFKLVQTRVTAEEIAEVV 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           S+ TGIPVSKMLE E++KLL MED LHKRV+GQ EAV  V++AIRRSRAGLSDPNRP GS
Sbjct: 541 SRWTGIPVSKMLEGERDKLLHMEDELHKRVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK LA F+FD+ DAMVR+DMSEFMEKHSV+RLVGAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKALAEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRR+PYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV++MTSNL
Sbjct: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL 720

Query: 721 GSSRIQENF-------ARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKS 773
           GS  IQ+         A   Y  +K  V+ VV  HFRPEF+NR+DE VVF PL +  I++
Sbjct: 721 GSQMIQDEVESNGSDDAEAQYTRMKASVLGVVQAHFRPEFINRLDEIVVFRPLDKSQIRA 780

Query: 774 IASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSI 833
           IA IQL  L +RLAER  +L+V D+AL L+ +VGFDPVYGARPLKRAIQQ +ENPLAK I
Sbjct: 781 IAKIQLEYLEKRLAERQLKLDVGDDALALLGNVGFDPVYGARPLKRAIQQQLENPLAKQI 840

Query: 834 LAGKFLPGSPILLSVK 849
           L G+F  G  + ++ +
Sbjct: 841 LEGRFQSGDTVKVAAE 856