Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 873 a.a., ATP-dependent chaperone ClpB from Variovorax sp. OAS795

 Score = 1058 bits (2736), Expect = 0.0
 Identities = 540/849 (63%), Positives = 678/849 (79%), Gaps = 8/849 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR D+ T+KF  A+SDAQ+LA+G D+ YIEP HL+VA+L Q+  P R LL    V+V  L
Sbjct: 1   MRQDKLTTKFNEALSDAQTLAIGNDNAYIEPAHLLVAMLRQDDGP-RALLERAGVNVHGL 59

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
            +     + +LP+V G    VQ+   LG L    +K A KR D +I+ E++LLA  + K 
Sbjct: 60  ANAAEAAIKKLPQVQG-HDVVQVGPELGKLLQATEKEAIKRNDQFIAGELFLLAVADSKS 118

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            +G + KE GL+ K +  AI+ +RGGQ VN  +AE  R+AL+K+ +DLTERA  GKLDPV
Sbjct: 119 DIGRIAKENGLSRKSLESAIDAVRGGQGVNSADAEGQREALKKYCLDLTERARLGKLDPV 178

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRD+EIRR IQVLQRRTKNNPV+IGEPGVGKTAIVEGLAQRI+  EVPE L+G+RVLSL
Sbjct: 179 IGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSL 238

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DM AL+AGAKYRGEFEERLK+VL+ELAK+EG  I+FIDELHTMVGAGK EG+MDAGNMLK
Sbjct: 239 DMAALLAGAKYRGEFEERLKTVLSELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 298

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTLDEYR+YIEKD ALERRFQK++V EP+VE TIAILRGL+E+YE+H
Sbjct: 299 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVH 358

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V+ITDPAIVAAA LS RYI+DR LPDKAIDLIDEAA+ I++++DSKPE +D+L+R++I
Sbjct: 359 HGVQITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLI 418

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QL+IE++A+  E DEAS+KR  ++ +E+   +++ A+ +E+W+AEKA   G+  I+  ++
Sbjct: 419 QLQIEREAVRREKDEASQKRFNLIEDEIARLQKEIADYDEIWQAEKAQAQGSAKIREDID 478

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQL-----DLAAQAEMQEMTLLRNKVTDAE 535
           + + ++E  +R GD N+++ELQYG++P LEK+L     + A++ +    TLLR +V   E
Sbjct: 479 KIKFEIEEWKRKGDFNKLAELQYGQLPALEKRLREAEENEASKGKSSAPTLLRTQVGSEE 538

Query: 536 IAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPN 595
           IAEV+++ TGIPV+K+++ E++KLL MED LH+RV+GQ EA+  VANAIRRSR+GLSDPN
Sbjct: 539 IAEVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPN 598

Query: 596 RPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVG 655
           RP GSFLFLGPTGVGKTELCK LA F+FDSED ++R+DMSEFMEKHSVARL+GAPPGYVG
Sbjct: 599 RPTGSFLFLGPTGVGKTELCKALAGFMFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVG 658

Query: 656 YEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715
           YEEGGYLTEAVRRKPYSV+LLDEVEKAH DVFN+LLQVLDDGRLTDGQGRTVDF+NTV++
Sbjct: 659 YEEGGYLTEAVRRKPYSVVLLDEVEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV 718

Query: 716 MTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIA 775
           MTSN+GS  IQ    +   + IKE V D +  +FRPEFLNR+DE+VVFH L  ++I+SIA
Sbjct: 719 MTSNIGSPIIQSMVGQ-PAEEIKEAVWDELKNYFRPEFLNRIDETVVFHALDAKNIESIA 777

Query: 776 SIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILA 835
           +IQL  L+ RLA+ D  LEV   AL  IA VGFDPV+GARPLKRAIQQ +ENPL+K +L 
Sbjct: 778 AIQLKVLKARLAKLDLGLEVSPAALAEIAKVGFDPVFGARPLKRAIQQRIENPLSKLLLD 837

Query: 836 GKFLPGSPI 844
           G F P   I
Sbjct: 838 GSFGPKDTI 846