Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

 Score = 1191 bits (3082), Expect = 0.0
 Identities = 601/853 (70%), Positives = 711/853 (83%), Gaps = 2/853 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR+DR TSK Q+AISDAQSLA+G DH  IEPVHL+ ALL+Q G  I+PLL  +  D+  L
Sbjct: 1   MRIDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           R  L + LD+LPK+    GDV +S  L  L N  D++AQ++ D +ISSE+ LLAA+++  
Sbjct: 61  RQGLVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENS 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            LG LL   G+++K +  AI  +RGG  VND NAEE RQAL+K+T+DLT+RAE+GKLDPV
Sbjct: 121 KLGKLLLSQGVSKKALENAINNLRGGAAVNDANAEESRQALDKYTVDLTKRAEEGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRRT+QVLQRRTKNNPV+IGEPGVGKTAI EGLAQRIIN EVP+GL+G+R+L+L
Sbjct: 181 IGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLAL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGAL+AGAKYRGEFEERLKS+LNEL+K+EG IILFIDELHTMVGAGKGEG+MDAGNMLK
Sbjct: 241 DMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTL+EYRQ+IEKD ALERRFQKVLV+EP+ EDTIAILRGLKERYE+H
Sbjct: 301 PALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V ITD AI+AAA LSHRYI+DRQLPDKAIDLIDEAAS IRM+IDSKPE LD+L+R++I
Sbjct: 361 HKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLK+E QAL  E DEA++KRL  L EE++  ER+Y++LEE+W +EKA + G+  I+  +E
Sbjct: 421 QLKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           Q+R +LE ARR GDLNRM+ELQYG IP+LE+ L +  Q    +  LLRNKVT+ EIAEV+
Sbjct: 481 QSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKTDNQLLRNKVTEEEIAEVV 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           SK TGIPV+KMLE E+EKLL+ME++LH+RVIGQ EAV  VANA+RRSRAGLSDPNRP GS
Sbjct: 541 SKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK LA FLFD+E+AMVR+DMSEFMEKHSVARL+GAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRRKPYSV+LLDEVEKAHPDVFN+LLQVL+DGRLTD  GRTVDFRNTV++MTSNL
Sbjct: 661 YLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 720

Query: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780
           GS++IQE     D +  +  VMD V  HFRPEF+NR+DE VVF PLG+E I  I  IQL 
Sbjct: 721 GSAQIQELVG--DREAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLG 778

Query: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840
           RLR RL ER+  L +  EALD +  VG+DPVYGARPLKRAIQ+ +ENPLA+ ILAGKFLP
Sbjct: 779 RLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILAGKFLP 838

Query: 841 GSPILLSVKDGNI 853
           G+ I   V+   I
Sbjct: 839 GTAITAKVEGDEI 851