Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 865 a.a., ATP-dependent chaperone ClpB from Paraburkholderia sabiae LMG 24235

 Score = 1130 bits (2922), Expect = 0.0
 Identities = 567/859 (66%), Positives = 700/859 (81%), Gaps = 7/859 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR+D+ T+KFQ A++DAQSLA+G D+QYIEPVHL+ AL+ Q     R LL    V V  L
Sbjct: 1   MRIDKLTTKFQEALADAQSLAVGHDNQYIEPVHLLAALVAQQDGSARSLLARAGVHVQAL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           ++ L + + RLP+V G  G+VQ+   L  L N  DK AQK  D YI+SE++LL+  +DKG
Sbjct: 61  QTALADAITRLPQVQGTDGNVQIGRDLTGLLNQADKEAQKLNDTYIASEMFLLSVADDKG 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
             G L +E GL+ K +  AI  +RGG +V+  +AE  R+AL+K+TIDLTERA  GKLDPV
Sbjct: 121 EAGRLAREHGLSRKSLEAAIVAVRGGAQVHSQDAESQREALKKYTIDLTERARAGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRR+IQ+LQRRTKNNPV+IGEPGVGKTAIVEGLAQRI+N EVPE L+G+RVLSL
Sbjct: 181 IGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DM AL+AGAKYRGEFEERLK+VLN++AK+EG  I+FIDE+HTMVGAGK EG+MDAGNMLK
Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PAL+RGELHCVGATTLDEYR+YIEKD ALERRFQKVLVDEP+VE TIAILRGL+ERYELH
Sbjct: 301 PALSRGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYELH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V+ITDPAIVAAA LSHRYI+DR LPDKAIDLIDEAAS I+M+IDSKPE +D+L+R+ I
Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLKIE++A+  E DEAS+KRL ++ EE++  +R+Y++LEE+W AEKAA+ G+  +K  +E
Sbjct: 421 QLKIEREAVKKEKDEASQKRLQLIEEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMT------LLRNKVTDA 534
           + R ++   +R G L +++ELQYG++P+LE+QL    +AE +E +      LLR +V   
Sbjct: 481 KTRAEITRLQREGKLEKVAELQYGKLPQLEQQLKAVTKAEAEEQSNPTRPRLLRTQVGAE 540

Query: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDP 594
           EIAEV+S+ TGIPVS+M++ E+EKLL++E+ LH+RV+GQ EA+  VA+AIRRSRAGLSDP
Sbjct: 541 EIAEVVSRATGIPVSRMMQGEREKLLQIEEKLHQRVVGQDEAISAVADAIRRSRAGLSDP 600

Query: 595 NRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYV 654
           NRP GSFLFLGPTGVGKTELCK LA FLFD+ED ++R+DMSEFMEKHSVARL+GAPPGYV
Sbjct: 601 NRPYGSFLFLGPTGVGKTELCKALAAFLFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYV 660

Query: 655 GYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714
           GYEEGGYLTEAVRRKPYSVILLDE+EKAHPDVFN+LLQVLDDGR+TDGQGRTVDF+NTV+
Sbjct: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720

Query: 715 IMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSI 774
           +MTSNLGS  IQ          +K+ V + V  HFRPEFLNR+D+ VVFH L + +I+SI
Sbjct: 721 VMTSNLGSQVIQSMVGE-PQDAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSI 779

Query: 775 ASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSIL 834
           A IQL R+ +RLA+ D QL V D AL+LI  VG+DP++GARPLKRAIQQ +ENP+AK IL
Sbjct: 780 AKIQLERVHERLAKLDMQLVVSDAALELIGKVGYDPLFGARPLKRAIQQEIENPVAKLIL 839

Query: 835 AGKFLPGSPILLSVKDGNI 853
           AGKF P   I + V +G +
Sbjct: 840 AGKFGPKDVIPVEVDNGKL 858