Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 862 a.a., ATP-dependent chaperone ClpB from Kangiella aquimarina DSM 16071

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 618/862 (71%), Positives = 732/862 (84%), Gaps = 5/862 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR+D+FTSKFQ A++DAQSLALG+DHQYIEP+HLM+++L Q G+ +  +L  +     QL
Sbjct: 1   MRMDKFTSKFQSALADAQSLALGKDHQYIEPLHLMLSMLQQQGNSVSAILNQIGAPAGQL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
            + +   L +LP+VSG GG+V +S  LG L N+CDK++Q+RQD YISSE++LLAA+EDKG
Sbjct: 61  INAIDAELAKLPQVSGTGGEVHISPDLGKLLNVCDKISQQRQDQYISSELFLLAALEDKG 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            LG LLK  G+T K V +AI +IRGGQ VNDPNAE+ RQALEK+TIDL  RAE GKLDPV
Sbjct: 121 SLGKLLKAQGVTTKMVEDAIAQIRGGQNVNDPNAEDNRQALEKYTIDLNARAESGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRR IQVLQRR+KNNPV+IG PGVGKTAIVEGLAQRI+N EVPEGL+ +RVLSL
Sbjct: 181 IGRDDEIRRCIQVLQRRSKNNPVLIGAPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGAL+AGAK+RGEFEERLK+VLN+LAKEEG +ILFIDELHTMVGAGK EG+MDAGNMLK
Sbjct: 241 DMGALIAGAKFRGEFEERLKAVLNDLAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTLDEYRQYIEKD ALERRFQKVLVDEPT EDTIAILRGLKERYE+H
Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTTEDTIAILRGLKERYEVH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H VEITDPAIVAA +LS RYI+DRQLPDKAIDLIDEAAS IRM+IDSKPEA+DKLER++I
Sbjct: 361 HGVEITDPAIVAATTLSQRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEAMDKLERRLI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLKI+++AL  E DE+S+KRL  L +++ E E+++AEL+E+W +EKA++ G Q+IKA L+
Sbjct: 421 QLKIQREALKKEEDESSKKRLLDLEQQIDELEKEFAELDEIWSSEKASVHGAQNIKADLD 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           +AR++LE A+RAGDL RMSELQYG IPELE +L   ++ +  EM LLRNKVTD EIAEV+
Sbjct: 481 KARVELEAAQRAGDLTRMSELQYGTIPELEAKLAKVSEQDTVEMQLLRNKVTDVEIAEVV 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           SK TGIPVSKMLE E+EKLLRME+VLH  VIGQ EAV  V+NAIRRSRAGLSDPNRP GS
Sbjct: 541 SKWTGIPVSKMLEGEREKLLRMEEVLHNNVIGQDEAVTAVSNAIRRSRAGLSDPNRPNGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCKTLA FLFDSED MVR+DMSEFMEKH+VARL+GAPPGYVGYE+GG
Sbjct: 601 FLFLGPTGVGKTELCKTLAKFLFDSEDNMVRIDMSEFMEKHAVARLIGAPPGYVGYEQGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRRKPYSVIL DEVEKAHPDVFN+LLQVL+DGRLTD QGRTVDF+NTV++MTSN+
Sbjct: 661 YLTEAVRRKPYSVILFDEVEKAHPDVFNVLLQVLEDGRLTDSQGRTVDFKNTVIVMTSNM 720

Query: 721 GSSRIQENFAR-----LDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIA 775
           GS  IQ +  +      DY+ +K  +MDV+ KHFRPEF+NR+DE VVFHPL +E IKSIA
Sbjct: 721 GSDLIQAHSGQSGDGDKDYEEMKTMLMDVIGKHFRPEFINRIDEIVVFHPLAKEQIKSIA 780

Query: 776 SIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILA 835
           +IQ+ RL QRL ++ + +EV D  LDL++  GFDPV+GARPLKRAIQ  VE+PLA++ILA
Sbjct: 781 AIQMERLLQRLRDQGFVVEVTDGLLDLLSESGFDPVFGARPLKRAIQHKVEDPLAQAILA 840

Query: 836 GKFLPGSPILLSVKDGNIFASQ 857
           G    G  + L V+  ++   Q
Sbjct: 841 GTVDIGKTLTLDVEGDHLSIKQ 862