Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., ATP-dependent chaperone ClpB from Erwinia tracheiphila SCR3

 Score = 1264 bits (3270), Expect = 0.0
 Identities = 640/857 (74%), Positives = 744/857 (86%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MRLDR T+KFQ+A++DAQSLALG D+Q+IEP+HLM ALL Q G  + PLLT   +DV  L
Sbjct: 5   MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLSQEGGSVGPLLTTAGIDVTSL 64

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
            + + + + RLP+V G  GDVQ SS L  + NLCDK AQKR D +ISSE+++LAA++ +G
Sbjct: 65  ANNIHQAITRLPRVEGSDGDVQPSSDLIRVLNLCDKFAQKRGDNFISSELFVLAALDSRG 124

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            L  LLK  G T +K++ A+E+IRGG+ VND  AE+ R AL+K+TIDLTERAE+GKLDPV
Sbjct: 125 SLADLLKLAGATSEKLARAVEQIRGGENVNDQGAEDQRHALKKYTIDLTERAEKGKLDPV 184

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRD+EIRRTIQVLQRRTKNNPV+IGEPGVGKTAIVEGLAQRIIN EVPEGL+GRRVL+L
Sbjct: 185 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 244

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGALVAGAKYRGEFEERLK VLN+L+K+EGN+ILFIDELHTMVGAGK +G+MDAGNMLK
Sbjct: 245 DMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKVDGAMDAGNMLK 304

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTLDEYRQYIEKD ALERRFQKV V EP+VEDTIAILRGLKERYELH
Sbjct: 305 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 364

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           HHV+ITDPAIVAAA+LSHRYI+DRQLPDKAIDLIDEAASSIRMQIDSKPE+LD+LER+II
Sbjct: 365 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRII 424

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLK+EQQAL  E D+AS KRL +L +EL  KERDY+ELEE WKAEKA+LSGTQ IKA LE
Sbjct: 425 QLKLEQQALKKESDDASIKRLDMLEDELTRKERDYSELEEEWKAEKASLSGTQTIKAELE 484

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           QA++ LE ARR+GDL +MSELQYG+IP+LEKQL  A Q+E + M LLRN VTD EIA+VL
Sbjct: 485 QAKLLLEQARRSGDLAQMSELQYGKIPDLEKQLASATQSEGKTMRLLRNCVTDIEIADVL 544

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           ++ TGIPV +M+E E++KLLRME  LH RVIGQ EAVE V+NAIRRSRAGL+DPNRPIGS
Sbjct: 545 ARWTGIPVDRMMEGERDKLLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPIGS 604

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK LA+F+FDS+DAMVR+DMSEFMEKH+V+RL+GAPPGY+GYEEGG
Sbjct: 605 FLFLGPTGVGKTELCKALAHFMFDSDDAMVRLDMSEFMEKHAVSRLIGAPPGYIGYEEGG 664

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRR+PYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
Sbjct: 665 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 724

Query: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780
           GS  IQE F  L Y  +K+ VM+VV+ HFRPEF+NR+DE VVFHPLG++HI SIA IQL 
Sbjct: 725 GSDLIQERFDALGYGEMKDVVMNVVTHHFRPEFINRIDEVVVFHPLGEKHIASIARIQLQ 784

Query: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840
           RL +RL ER Y+L + D+AL ++A  G+DPVYGARPLKRAIQQ++ENPLA+ IL+G  +P
Sbjct: 785 RLYKRLNERGYELYISDKALHMLAENGYDPVYGARPLKRAIQQHIENPLAQQILSGSLVP 844

Query: 841 GSPILLSVKDGNIFASQ 857
           G  I + V++  I A Q
Sbjct: 845 GKKIEMDVENDTIIAHQ 861