Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 862 a.a., ATP-dependent chaperone ClpB from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  953 bits (2463), Expect = 0.0
 Identities = 484/854 (56%), Positives = 637/854 (74%), Gaps = 1/854 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           M L+ ++ + + A+  AQSLAL R HQ   P HL+  LL++     R L+T    D  + 
Sbjct: 1   MNLELYSDRAKQAVQSAQSLALARRHQQFAPEHLLKVLLEERDGLARNLITAAGGDARRA 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
            + +   L +  +VSG  G + L      +F   ++ ++   DA++++E  L A  ++ G
Sbjct: 61  EADVETALKKRAQVSGGSGQLYLDGDTARVFATAEEASKTAGDAFVTTERLLAALAKEGG 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
               +LK  G+T  K+  AI ++R G+  +   AE+   AL+++  DLT  A  GK+DPV
Sbjct: 121 VAAEVLKASGVTADKLEAAIAEVRKGKTADSAGAEDGYDALKRYARDLTLAARDGKIDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRD+EIRRTIQVL RRTKNNPV+IGEPGVGKTAIVEGLA RI+N +VPE LR + V++L
Sbjct: 181 IGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLRDKTVMAL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMG+L+AGAKYRGEFEERLK+VL+E+   EG IILFIDE+HT+VGAGKG+G+MDA N+LK
Sbjct: 241 DMGSLIAGAKYRGEFEERLKAVLSEVTAAEGGIILFIDEMHTLVGAGKGDGAMDASNLLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTLDEYR+++EKD AL RRFQ V V EPTVEDT++ILRGLKE+YE+H
Sbjct: 301 PALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVAEPTVEDTVSILRGLKEKYEVH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V I+D AIVAAA+LS+RYI+DR LPDKAIDLIDEAAS +RM +DSKPEALD+++R+++
Sbjct: 361 HGVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEAASRVRMAVDSKPEALDEIDRRLV 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLKIE++AL  E D+AS+ RL  L +E+ + E    +L   WKAEK  +     ++  L+
Sbjct: 421 QLKIEREALKKETDQASQHRLEKLEDEIADLEGQSDDLTAQWKAEKDKVGQGAQLRETLD 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAE-IAEV 539
           + R++L  A+RAGDL R SE+ YG+IP++EKQL+ A   E      L  +V DAE IA V
Sbjct: 481 RLRLELANAQRAGDLGRASEIAYGQIPQIEKQLEEAEANETSGKGPLTPEVVDAEQIAAV 540

Query: 540 LSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIG 599
           +S+ TG+PV KMLE E+EKLL+ME  L  RV+GQ EA+  V++A+RR+RAGL+DPNRP+G
Sbjct: 541 VSRWTGVPVDKMLEGEREKLLQMETALGGRVVGQDEALAAVSDAVRRARAGLNDPNRPLG 600

Query: 600 SFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEG 659
           SFLFLGPTGVGKTEL K LA+FLFD E A+ R+DMSE+MEKHSV+RL+GAPPGYVGY+EG
Sbjct: 601 SFLFLGPTGVGKTELTKALADFLFDDEAAITRLDMSEYMEKHSVSRLIGAPPGYVGYDEG 660

Query: 660 GYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719
           G LTEAVRR+PY V+L DEVEKAHPDVFN+LLQVLDDGRLTDGQGRT+DFRNT++IMTSN
Sbjct: 661 GALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTIDFRNTLIIMTSN 720

Query: 720 LGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQL 779
           LGS  + +     D + ++  VMD V  HFRPEFLNR+DE ++FH LG++ +  I  IQL
Sbjct: 721 LGSQYLADQGEGDDVEAVRPFVMDAVRAHFRPEFLNRIDEIILFHRLGRDQMGGIVRIQL 780

Query: 780 ARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFL 839
           +R  + LA+R   L++DD AL  +A  G+DP YGARPLKR IQ+++ +P+A+ +LAG+  
Sbjct: 781 SRFEKLLADRRLTLDLDDSALAWLADRGYDPAYGARPLKRVIQKDLVDPIARKLLAGEIE 840

Query: 840 PGSPILLSVKDGNI 853
            G  I ++  +G +
Sbjct: 841 DGGVIAVTAGEGGL 854