Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., protein disaggregation chaperone from Escherichia coli BL21

 Score = 1295 bits (3350), Expect = 0.0
 Identities = 654/857 (76%), Positives = 751/857 (87%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MRLDR T+KFQ+A++DAQSLALG D+Q+IEP+HLM ALL+Q G  + PLLT   ++  QL
Sbjct: 1   MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           R+ + + L+RLP+V G GGDVQ S  L  + NLCDK+AQKR D +ISSE+++LAA+E +G
Sbjct: 61  RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            L  +LK  G T   +++AIE++RGG+ VND  AE+ RQAL+K+TIDLTERAEQGKLDPV
Sbjct: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRD+EIRRTIQVLQRRTKNNPV+IGEPGVGKTAIVEGLAQRIIN EVPEGL+GRRVL+L
Sbjct: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGALVAGAKYRGEFEERLK VLN+LAK+EGN+ILFIDELHTMVGAGK +G+MDAGNMLK
Sbjct: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTLDEYRQYIEKD ALERRFQKV V EP+VEDTIAILRGLKERYELH
Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           HHV+ITDPAIVAAA+LSHRYI+DRQLPDKAIDLIDEAASSIRMQIDSKPE LD+L+R+II
Sbjct: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLK+EQQAL  E DEAS+KRL +LNEEL +KER Y+ELEE WKAEKA+LSGTQ IKA LE
Sbjct: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           QA++ +E ARR GDL RMSELQYG+IPELEKQL+ A Q E + M LLRNKVTDAEIAEVL
Sbjct: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           ++ TGIPVS+M+E+E+EKLLRME  LH RVIGQ EAV+ V+NAIRRSRAGL+DPNRPIGS
Sbjct: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK LANF+FDS++AMVR+DMSEFMEKHSV+RLVGAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRR+PYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
Sbjct: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720

Query: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780
           GS  IQE F  LDY  +KE V+ VVS +FRPEF+NR+DE VVFHPLG++HI SIA IQL 
Sbjct: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780

Query: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840
           RL +RL ER Y++ + DEAL L++  G+DPVYGARPLKRAIQQ +ENPLA+ IL+G+ +P
Sbjct: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840

Query: 841 GSPILLSVKDGNIFASQ 857
           G  I L V +  I A Q
Sbjct: 841 GKVIRLEVNEDRIVAVQ 857