Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., Heat shock protein F84.1 from Alteromonas macleodii MIT1002

 Score = 1306 bits (3380), Expect = 0.0
 Identities = 655/854 (76%), Positives = 749/854 (87%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MRLDRFTSKFQ+AISDAQSLALGRDHQYIEPVHLM A+L+Q G  +RPLL   N++V  L
Sbjct: 1   MRLDRFTSKFQLAISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQANINVNAL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           RS L + ++RLP++ GIGGDVQLS   G L NLCDK+AQ+R+D YI+SEI++LAA++DKG
Sbjct: 61  RSALSQAIERLPRIEGIGGDVQLSKDSGILLNLCDKIAQQRKDEYITSEIFVLAALQDKG 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            LG +LK   +T++ +  AI+ +RGGQKV DPNAE++RQALEK+T DLTERAEQGKLDPV
Sbjct: 121 RLGEILKSLNITKEAIESAIDDMRGGQKVTDPNAEDVRQALEKYTTDLTERAEQGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRRT+QVLQRRTKNNPV+IGEPGVGKTAIVEGLAQRIIN EVPEGL+ +RVL+L
Sbjct: 181 IGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLAL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGALVAGAKYRGEFEERLK+VLNELAKEEG +ILF+DELHTMVGAGKG+G+MDAGNMLK
Sbjct: 241 DMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTLDEYRQYIEKD ALERRFQKVLV+EP+VEDTIAILRGLKERYELH
Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V+ITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIR+QIDSKPE +D+LER+II
Sbjct: 361 HSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRLQIDSKPEEMDRLERRII 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLK+E+QAL+ E D+AS KRL ++  E ++ E  YAELE+VW  EK A+ GTQ IK  LE
Sbjct: 421 QLKLEEQALAKETDDASHKRLEMIELEREQAETKYAELEKVWLDEKDAMQGTQSIKGELE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           QA++DLE+ARRA DLNRMSELQYGRIPELE +L+ AA+ E +E TLL+NKVTD EIA+VL
Sbjct: 481 QAKLDLEIARRASDLNRMSELQYGRIPELEAKLEQAAENETRETTLLKNKVTDVEIADVL 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           S+ TGIPV++MLE E+EKLLRMEDVLHKRV+GQ+EAVE V+NAIRRSRAGL+DPNRPIGS
Sbjct: 541 SRWTGIPVARMLEGEREKLLRMEDVLHKRVVGQEEAVEAVSNAIRRSRAGLADPNRPIGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK LA F+FD+EDAMVR+DMSEFMEKHSVARLVGAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF+NTVVIMTSNL
Sbjct: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNL 720

Query: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780
           GS  IQ+      Y  +K  VM VV +HFRPEF+NRVD+ VVFHPLG+E IKSIA IQLA
Sbjct: 721 GSDIIQDKHNESQYDDMKASVMSVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLA 780

Query: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840
            LR RLAE+ Y+L +   A+D +A  GFDPV+GARPLKRAIQ  VENPLA  +LAG+ +P
Sbjct: 781 SLRARLAEKGYKLTLSAAAMDKLADAGFDPVFGARPLKRAIQVQVENPLAHQLLAGELIP 840

Query: 841 GSPILLSVKDGNIF 854
            S I +   D  +F
Sbjct: 841 ESTIRIDADDSGLF 854