Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Rhodanobacter sp000427505 FW510-R12

 Score =  311 bits (798), Expect = 1e-89
 Identities = 160/310 (51%), Positives = 210/310 (67%), Gaps = 3/310 (0%)

Query: 17  GQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVMGGEVITVQAELEDEQR 76
           G+R DQA+AE+F D+SRSRL  W+  G + ++G     PR  + GGE + ++ ELE+E  
Sbjct: 16  GRRFDQALAEMFPDYSRSRLSGWIKSGAVTLDG-APAPPRQLLRGGERVQLRVELENEVA 74

Query: 77  WEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLFHYSPIAEVPRAGIVH 136
             A+D+ L IV+ED+ ++V++KP   VVHPGAG    T+LNALL H   +AE+PRAGIVH
Sbjct: 75  SAAEDIALAIVHEDEHLLVLDKPAGLVVHPGAGNPAGTLLNALLHHDPRLAELPRAGIVH 134

Query: 137 RLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMTAGGMIDKPIGRHSTKR 196
           RLDKDT+GLMVVA+T+P  T LV  L + +V R+YEA+V+GT+ AGG +D PIGR    R
Sbjct: 135 RLDKDTSGLMVVARTLPTYTALVDLLSRHEVERQYEAVVLGTLVAGGTVDAPIGRSLGDR 194

Query: 197 TLMSV--SPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHMAYLQHPLLGDTAYG 254
              +V     GK AVTHYRV E FR H+ L+ RLETGRTHQIRVH+A++ HPL+GD  YG
Sbjct: 195 LRQAVRDEEDGKRAVTHYRVRERFRAHSLLQCRLETGRTHQIRVHLAHISHPLVGDPLYG 254

Query: 255 GRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPVPDDMVEMTLALRE 314
           G  ++PKGA+ EL   +R F RQALHA  L F HP TGE + F A  P D   +   LR 
Sbjct: 255 GGLKLPKGASAELAAALRGFRRQALHAEQLAFIHPATGEAMSFGAERPADQQRLIETLRA 314

Query: 315 DAKLNRTEEY 324
           D   + ++ Y
Sbjct: 315 DLAEHGSDHY 324