Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  456 bits (1172), Expect = e-133
 Identities = 217/315 (68%), Positives = 264/315 (83%)

Query: 1   MAHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVM 60
           MA +++LT TV ++QLGQRLDQA+AE+F D+SRSR+KEW+L  ++ VNG +  KP+ KV+
Sbjct: 1   MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILNQRVLVNGQLCDKPKEKVL 60

Query: 61  GGEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALL 120
           GGE + + AE+++E R+EAQD+PL+IVYEDDDI+VINKPRD VVHPGAG  D TVLNALL
Sbjct: 61  GGERVAIDAEIDEEIRFEAQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALL 120

Query: 121 FHYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT 180
            +Y PIA+VPRAGIVHRLDKDTTGLMVVAKTVPAQTRLV +LQ R++TREYEA+ IG MT
Sbjct: 121 HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMT 180

Query: 181 AGGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM 240
           AGG +++PI RH TKRT MSV PMGK AVTHYR+ EHFR HTRLRLRLETGRTHQIRVHM
Sbjct: 181 AGGTVNEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM 240

Query: 241 AYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAP 300
           A++ HPL+GD  YGGR R PKGA+EE    +R FDRQALHA ML+  HPV+G E+E+HAP
Sbjct: 241 AHITHPLVGDQVYGGRPRPPKGASEEFISTLRKFDRQALHATMLRLYHPVSGIEMEWHAP 300

Query: 301 VPDDMVEMTLALRED 315
           +P DMV++  A+R D
Sbjct: 301 IPQDMVDLIDAMRAD 315