Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., pseudouridine synthase, RluA family from Enterobacter asburiae PDN3

 Score =  457 bits (1175), Expect = e-133
 Identities = 216/315 (68%), Positives = 265/315 (84%)

Query: 1   MAHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVM 60
           MA ++ELT TV ++QLGQRLDQA+AELF D+SRSR+KEW+L+ ++ VNG +  KP+ KV+
Sbjct: 1   MAQRVELTATVSENQLGQRLDQALAELFPDYSRSRIKEWILDQRVLVNGKIWDKPKEKVL 60

Query: 61  GGEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALL 120
           GGE + + AE+E+E R+E QD+PL+IVYEDDDI+VINKPRD VVHPGAG  D TVLNALL
Sbjct: 61  GGEAVAINAEIEEEIRFEPQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALL 120

Query: 121 FHYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT 180
            +Y PIA+VPRAGIVHRLDKDTTGLMVVAKTVPAQTRLV +LQ R++TREYEA+ IG MT
Sbjct: 121 HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMT 180

Query: 181 AGGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM 240
           +GG +++PI RH TKRT MSV PMGK AVTHYR+ EHFR HTRLRLRLETGRTHQIRVHM
Sbjct: 181 SGGTVEEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRIHTRLRLRLETGRTHQIRVHM 240

Query: 241 AYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAP 300
           A++ HPL+GD  YGGR R PKGA++E   ++R FDRQALHA ML+  HP+TG ++E+HAP
Sbjct: 241 AHITHPLVGDQVYGGRPRPPKGASDEFISVLRKFDRQALHATMLRLYHPITGIQMEWHAP 300

Query: 301 VPDDMVEMTLALRED 315
           +P DMV++  A+R D
Sbjct: 301 IPQDMVDLIDAMRAD 315