Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Dickeya dianthicola ME23

 Score =  454 bits (1169), Expect = e-132
 Identities = 213/315 (67%), Positives = 264/315 (83%)

Query: 1   MAHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVM 60
           M+ Q++LT TV +SQLGQRLDQA+AELF D+SRSR+K W+LE ++ +NG+++ KP+ KV+
Sbjct: 1   MSQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKTWILEQRVQINGNMVDKPKEKVL 60

Query: 61  GGEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALL 120
           GGE + + A +E++ RWEAQ + L+IVYED DI+VINKPR+ VVHPGAG  D TVLNALL
Sbjct: 61  GGESVAIDALIEEDARWEAQPISLDIVYEDGDILVINKPRNLVVHPGAGNPDGTVLNALL 120

Query: 121 FHYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT 180
            HY  I +VPRAGIVHRLDKDTTGLMVVAKTVPAQTRLV +LQ R++TREYEA+ IGTMT
Sbjct: 121 HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQAREITREYEAVAIGTMT 180

Query: 181 AGGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM 240
           AGG +++PI RHSTKRT M+V PMGK AVTHYR+ EHFR HTRLRLRLETGRTHQIRVHM
Sbjct: 181 AGGTVEEPIARHSTKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM 240

Query: 241 AYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAP 300
           A++ HPL+GD  YGGR R+PKGA+E   E +R+FDRQALHA ML+  HP++G E+E+HAP
Sbjct: 241 AHINHPLVGDPLYGGRPRLPKGASETFIETLRNFDRQALHATMLRLYHPISGIEMEWHAP 300

Query: 301 VPDDMVEMTLALRED 315
           +P DMV++  AL+ D
Sbjct: 301 LPQDMVDLIAALKAD 315