Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Ribosomal large subunit pseudouridine synthase D from Alteromonas macleodii MIT1002

 Score =  386 bits (991), Expect = e-112
 Identities = 190/315 (60%), Positives = 241/315 (76%)

Query: 5   IELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVMGGEV 64
           I+L  + + +  G RLDQ +A+LF ++SRS+LK W+ +G +AVNG+VIT PR K+   E+
Sbjct: 8   IQLEASTEAAHFGLRLDQVLADLFPEYSRSKLKTWIQDGNVAVNGEVITVPRHKMQMDEL 67

Query: 65  ITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLFHYS 124
           +TVQAE++ +   EAQD+ LNIVYED+ I+VINKP D VVHPGAG    TVLNALL H  
Sbjct: 68  VTVQAEMDVQVTSEAQDIALNIVYEDEHILVINKPADLVVHPGAGNPSGTVLNALLNHCP 127

Query: 125 PIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMTAGGM 184
            I +VPRAGIVHRLDKDTTGLMVVAKT+PAQT LV  LQ+R+++REYEA+ +GTM AGG+
Sbjct: 128 EIDKVPRAGIVHRLDKDTTGLMVVAKTIPAQTHLVDQLQRREMSREYEAVALGTMVAGGI 187

Query: 185 IDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHMAYLQ 244
           +D PIGRH+TKRT M+V  MGK AVTH+RV E FR +T LRL+LETGRTHQIRVHMA+++
Sbjct: 188 VDAPIGRHATKRTHMAVREMGKPAVTHFRVIEKFRAYTHLRLKLETGRTHQIRVHMAHIK 247

Query: 245 HPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPVPDD 304
           HPLLGD  YGGR R+PKGA+EE    +R F RQALHA  L   HP T E + + AP+P D
Sbjct: 248 HPLLGDQVYGGRPRLPKGASEEFIAALRGFQRQALHAAQLSLFHPETEEWMTWKAPLPQD 307

Query: 305 MVEMTLALREDAKLN 319
           M ++  A+++D   N
Sbjct: 308 MQDLLKAVKKDTADN 322