Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., Ribosomal large subunit pseudouridine synthase D from Acinetobacter radioresistens SK82

 Score =  316 bits (810), Expect = 5e-91
 Identities = 156/314 (49%), Positives = 218/314 (69%), Gaps = 1/314 (0%)

Query: 2   AHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVMG 61
           A ++ L   + +S LGQR+DQA A ++ +FSR +LK+W+ +G + VNG+ + KP+ K  G
Sbjct: 34  ATRLSLQFQLDESYLGQRIDQAAALVWNEFSREKLKQWIKDGHLLVNGNNV-KPKYKCEG 92

Query: 62  GEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLF 121
            E++T++AELE +   + +++PL+I+YEDDDIIVINK    VVHPGAG    T++NALL+
Sbjct: 93  NELLTLEAELEIQTASQPENIPLDIIYEDDDIIVINKTVGMVVHPGAGNGSGTLVNALLY 152

Query: 122 HYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMTA 181
           HY    E+ RAG+VHR+DKDT+GL+VVAK + AQ  L + L K+ V R Y+ +V G + A
Sbjct: 153 HYPKSNELARAGLVHRIDKDTSGLLVVAKNLEAQFSLSKQLAKKTVYRIYDLVVYGNIVA 212

Query: 182 GGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHMA 241
           GG ID+PI RH   R  M++ P GK AVTHY V E F++ TR++ +LETGRTHQIRVH +
Sbjct: 213 GGTIDEPIKRHPVDRVKMAILPGGKEAVTHYNVKERFKDFTRVQAQLETGRTHQIRVHFS 272

Query: 242 YLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPV 301
           Y+ + L+GD  Y  R R+P GA+EEL + +R F RQALHA  L   HP TGE + F AP 
Sbjct: 273 YIGYGLVGDPVYMSRVRVPAGASEELADTLRSFKRQALHAAKLGLVHPRTGENMMFEAPW 332

Query: 302 PDDMVEMTLALRED 315
           P+D   +   LR++
Sbjct: 333 PEDFKHLIEVLRQE 346