Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., outer membrane protein assembly factor BamD from Rhodanobacter sp000427505 FW510-R12

 Score =  127 bits (320), Expect = 2e-34
 Identities = 76/246 (30%), Positives = 130/246 (52%), Gaps = 8/246 (3%)

Query: 2   KYQTLSGLLALSLLFGCS------SSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEA 55
           K   L  L+ L+L+   S      S  D +  +P   LY  A  +LQ+  +  A +  + 
Sbjct: 14  KLPVLKVLVVLALVVSMSACSMFKSKRDTIDTMPLVALYDNAHASLQNTDYAAATKAYQR 73

Query: 56  LDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHM 115
           L +R+P G Y+EQ QL++ YA YK++      +T+ RF +  P ++ +D+  Y+RGL + 
Sbjct: 74  LIARFPSGEYNEQAQLEMAYAQYKDNQPDDASSTVNRFIKTYPANKHVDYAYYLRGLINF 133

Query: 116 AQDRNFMHDLFNI--DRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLA 173
            +    +    N    +  RD      +F DF +L +R+P+S Y  DA++RM  L+N LA
Sbjct: 134 DRTSGMIDRYINRKGSQARRDQGYNLQSFDDFSELSRRFPDSAYTADARQRMIYLRNILA 193

Query: 174 EYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTK 233
           +Y++  A+FYLR +A+IAA +R Q + + Y        +L I   +Y  L      ++++
Sbjct: 194 QYEINVAEFYLRNKAYIAAADRAQYVIEHYQQAPQTGDALAILSRSYLALDQKTLADQSR 253

Query: 234 QLMQLN 239
           Q++ LN
Sbjct: 254 QVLALN 259