Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Outer membrane protein assembly factor BamD from Xanthobacter sp. DMC5

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 13/233 (5%)

Query: 10  LALSLLF-GCSSSPD--VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYS 66
           LA+ LL  GC+S  D  + PD P  ++Y+E  T L+      A ++ E +D  +P+  ++
Sbjct: 33  LAMGLLVSGCASDKDDTIPPDEPAEKIYNEGLTLLRRQEPEKAAKRFEDVDRAHPYSEWA 92

Query: 67  EQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLF 126
            +  L   Y+Y++       +   +R+  L P      +  Y+          + +++  
Sbjct: 93  RKALLMTTYSYFEAGKYDEAIGVGKRYIALYPGSADAAYAQYLVA--------SALYE-- 142

Query: 127 NIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRR 186
           NI    RD    + A    + ++++YPN+ YA  A+R++   +++LA  ++A   +YL +
Sbjct: 143 NIPDITRDQRKTRQALDALEAVVRKYPNTEYAATAKRKIEVARDQLAGKEMAIGRYYLEQ 202

Query: 187 EAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
             +  AINR + +   Y  T    ++L    E Y  +G+    +    ++  N
Sbjct: 203 RNYTGAINRFKVVVTQYQTTRQVEEALYRLTECYMAMGIVGEAQTAAAVLGYN 255