Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., competence lipoprotein ComL, putative from Sphingobium sp. HT1-2

 Score = 85.9 bits (211), Expect = 7e-22
 Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 35/256 (13%)

Query: 9   LLALSLLFGCSSSPD------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPF 62
           L+A  +L GCS+S +      V  DV  S LY+  +  L  G +  A    + ++ ++P+
Sbjct: 21  LIASPVLTGCSTSKNKADTLYVARDV--STLYNSGKARLDRGQYKLAAALFDEVERQHPY 78

Query: 63  GAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFM 122
             ++ + QL   ++YY N D    +A  +RF  ++  ++   +  Y+  L +  Q     
Sbjct: 79  SPWARRAQLMSAFSYYMNRDYPESIAASQRFLSIHTGNKDAPYAYYLIALCYYEQ----- 133

Query: 123 HDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADF 182
                I    RD +  + A     +L++RYP++ YA DA+ ++  + + LA  ++    F
Sbjct: 134 -----IADVTRDQKITQQAMDALGELIRRYPDTRYAADARLKVDLVNDHLAGKEMELGRF 188

Query: 183 YLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGL----------------- 225
           Y RR  W+AA  R + +   +  T    ++LE  +E+Y  LG+                 
Sbjct: 189 YQRRGQWLAATLRFRTVIDKFQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPG 248

Query: 226 TDAIERTKQLMQLNPL 241
           T   ER+ +LMQ +P+
Sbjct: 249 TKWYERSYKLMQQHPV 264