Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Outer membrane protein assembly factor BamD from Pseudomonas putida KT2440

 Score =  184 bits (466), Expect = 3e-51
 Identities = 90/240 (37%), Positives = 150/240 (62%), Gaps = 1/240 (0%)

Query: 1   MKYQTLSGLLALSLLFGCSSSPDVVPD-VPPSQLYSEAQTALQSGTWLTAIEKLEALDSR 59
           M+ + L  +  L L   CSS+ +V+ + +  ++LY +AQ  L + ++ +A+ KL+AL+SR
Sbjct: 1   MRVKHLLLIAILGLTAACSSNKEVIDENLSEAELYQQAQADLDNSSYTSAVNKLKALESR 60

Query: 60  YPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDR 119
           YPFG Y++Q QL+LIYA YKN +     +  ERF RL+P H  +D+  Y++GLT   QDR
Sbjct: 61  YPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDR 120

Query: 120 NFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLAT 179
             +     +D   RDP   + ++ +F +L  R+PNS YA DA++RM  L+N LA Y++  
Sbjct: 121 GLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHV 180

Query: 180 ADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
           AD+YL R+A++AA NR + + + + +T +    L + +E+YQ+L L +    + + ++LN
Sbjct: 181 ADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLN 240