Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  145 bits (366), Expect = 7e-40
 Identities = 80/225 (35%), Positives = 128/225 (56%), Gaps = 1/225 (0%)

Query: 14  LLFGCSSSP-DVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLD 72
           +L  CS++P D      P+++YSEA     +G +  ++   E L+ R      ++Q QLD
Sbjct: 6   VLSACSTTPVDETAGWSPNRIYSEATEERAAGNYEKSVTLYEKLEGRAAGTPLAQQAQLD 65

Query: 73  LIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRD 132
             YA YK  + A  LAT++RF +L+PT   MD+ LY++GL +   +      L   D  +
Sbjct: 66  KAYAQYKASEQAQALATLDRFQKLHPTSPAMDYALYLKGLVNFNDNLGLFGSLARQDLSE 125

Query: 133 RDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAA 192
           RD +  K +F  F++L+ R+P+S Y+ DA+ RM  + N LA+Y++  A +Y  R A++AA
Sbjct: 126 RDQKAAKESFGAFRELVTRFPDSRYSPDARDRMTYIVNSLAQYEVHVARYYHSRGAYVAA 185

Query: 193 INRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 237
           INR Q     Y +  A  ++L I L +Y  LGLT   + T+++MQ
Sbjct: 186 INRAQTALTDYVNAPALEEALFIMLRSYDALGLTQLRDDTRRVMQ 230