Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  253 bits (647), Expect = 2e-72
 Identities = 121/239 (50%), Positives = 166/239 (69%), Gaps = 1/239 (0%)

Query: 1   MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRY 60
           MKY   +  L+L  L GCS S + VPD PP+++Y+ AQ  LQ G W  AI +LEALD+RY
Sbjct: 4   MKYLVAAATLSL-FLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWKQAITQLEALDNRY 62

Query: 61  PFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRN 120
           PFG YS+QVQLDLIYAYYKN DL L  A I+RF RLNPTH  +D+V+YMRGLT+MA D +
Sbjct: 63  PFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRGLTNMALDDS 122

Query: 121 FMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATA 180
            +   F +DR DRDP+  +AAF DF KL++ YPNS Y  DA +R+  LK+RLA+Y+ + A
Sbjct: 123 ALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVA 182

Query: 181 DFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
           ++Y  R AW+A +NR + + + YPDT+A R +L +   AY+Q+ L    ++  +++  N
Sbjct: 183 EYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADKVAKIIAAN 241