Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., outer membrane protein assembly factor BamD from Escherichia coli ECRC98

 Score =  254 bits (650), Expect = 8e-73
 Identities = 121/239 (50%), Positives = 167/239 (69%), Gaps = 1/239 (0%)

Query: 1   MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRY 60
           MKY   +  L+L  L GCS S + VPD PP+++Y+ AQ  LQ G W  AI +LEALD+RY
Sbjct: 4   MKYLVAAATLSL-FLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDNRY 62

Query: 61  PFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRN 120
           PFG YS+QVQLDLIYAYYKN DL L  A I+RF RLNPTH  +D+V+YMRGLT+MA D +
Sbjct: 63  PFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDS 122

Query: 121 FMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATA 180
            +   F +DR DRDP+  +AAF+DF KL++ YPNS Y  DA +R+  LK+RLA+Y+ + A
Sbjct: 123 ALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVA 182

Query: 181 DFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
           ++Y  R AW+A +NR + + + YPDT+A R +L +   AY+Q+ +    E+  +++  N
Sbjct: 183 EYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAAN 241