Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., outer membrane protein assembly factor BamD from Dickeya dianthicola ME23

 Score =  254 bits (648), Expect = 1e-72
 Identities = 123/240 (51%), Positives = 171/240 (71%), Gaps = 1/240 (0%)

Query: 1   MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRY 60
           MKY   +  L+L+L  GCS+S D VPD PPS+LY+ AQ  LQ G +  AI +LEALD+RY
Sbjct: 4   MKYLVAAATLSLTLA-GCSNSKDAVPDRPPSELYATAQEKLQDGNFKAAITQLEALDNRY 62

Query: 61  PFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRN 120
           PFG Y++QVQLDLIYAYYK+ +L L  A+I+RF RLNPTH  +D+VLYMRGLT+MAQD +
Sbjct: 63  PFGPYAQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRGLTNMAQDDS 122

Query: 121 FMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATA 180
            +   F +DR DRDP+  ++AF  F +LLQ YPNS YA D  +R+  LK RLA+Y+L+ A
Sbjct: 123 ALQGFFGVDRSDRDPQYARSAFKAFSQLLQGYPNSQYATDTSKRLAFLKERLAKYELSVA 182

Query: 181 DFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLNP 240
            +Y +R A++A +NR +++ K YPDT+A R +L +   AY++L L    ++  +++  NP
Sbjct: 183 QYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLIAQADKVAKIIAANP 242