Pairwise Alignments

Query, 108 a.a., ribosomal subunit interface protein from Vibrio cholerae E7946 ATCC 55056

Subject, 113 a.a., cold shock protein associated with 30S ribosomal subunit from Escherichia coli BL21

 Score =  101 bits (252), Expect = 2e-27
 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 1/98 (1%)

Query: 1  MKINITGKNIEVTSAIRNHIEGKLKKLEKWQVDIIGCQASFSEEPNKQKKFEAVVSIPRG 60
          M +NIT K +E+T AIR H+  +L KLEKWQ  +I      S+EP      +A ++ P G
Sbjct: 1  MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVA-DATINTPNG 59

Query: 61 QLVASAIHEDLYAAINEVEQKLERQLNKLRHKPEARRA 98
           LVAS  HED+Y AINE+  KLERQLNKL+HK EARRA
Sbjct: 60 VLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRA 97