Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 16/320 (5%)

Query: 19  LSLMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLK 78
           L    L T    A   EL  Y W + I   V+E + K+TG+ V ++     +E     LK
Sbjct: 10  LCAAALFTTNAMAKDQELYFYNWSEYIPSEVLEDFTKETGIKV-IYSTYESNESMYAKLK 68

Query: 79  SVQLPFDIMVLDNVSAFIFSRQNVFEDL--TALPNRANNDPMWLQAC----GTHAVPYFW 132
           +    +D++V          ++ + +++  + L +  + DP +L          ++PY W
Sbjct: 69  TQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKFSIPYIW 128

Query: 133 GSVGIAYRKSLFDKPPTQ-WSEVVDIAPAHRGRVGMLKDSVETLLPALYMLNASPITDSI 191
           G+ GI     + DK   + W ++ D   A  G++ ++ D+ E    AL  L  SP T + 
Sbjct: 129 GATGIGINTDMLDKKSLKNWGDLWDAKWA--GQLMLMDDAREVFHIALSKLGYSPNTTNP 186

Query: 192 DTLRQAYRLLDAANPHILTYEYVLSYVRSHPQ-TDNLHMAVSYSGDHYSLNRFFNTQDWD 250
             ++ AYR L    P++L +    S   ++P     + + + ++G  Y   +        
Sbjct: 187 KEIKAAYRELKKLMPNVLVFN---SDFPANPYLAGEVSLGMLWNGSAYMARQ--EGAPIQ 241

Query: 251 FSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALL 310
              PE     W+D +++ + + N   A   +DFL++P+ AA  A  I   +P   A  LL
Sbjct: 242 IIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDLL 301

Query: 311 PVEHREDLSIYLPEQRLAEG 330
           P E   D SIY P+  +  G
Sbjct: 302 PKEFANDPSIYPPQSVIDNG 321