Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 37/332 (11%)

Query: 19  LSLMVLNTVCYQASALE---LNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLL 75
           +SL     VC +A   +   +++Y W D IAP+ V+ + K+ GVSV    FDN +     
Sbjct: 12  VSLFSFGVVCAEAGDAQKPSVHIYNWYDYIAPNTVKDFQKEAGVSVVYDVFDNSEVMQSK 71

Query: 76  MLKSVQLPFDIMV-----LDN-VSAFIFSRQNVFEDLTALPNRANNDPMWLQAC------ 123
           ++   +  +D++V     L N + A +  R     D + LPN ++ DP  L         
Sbjct: 72  LMAG-RSGYDVVVASADLLPNLIKAGVLKRL----DRSKLPNWSHLDPDVLAKLQSNDPG 126

Query: 124 GTHAVPYFWGSVGIAYR----KSLF--DKPPTQWSEVV---DIAPAHRGRVGMLKDSVET 174
            ++A PY WG+ GI Y     KSL   D P   W  +    ++A   +  V ML    E 
Sbjct: 127 NSYAAPYLWGTTGIGYDADKVKSLLGPDAPVNSWDLIFKEENLAKLRQCGVAMLDAPGEV 186

Query: 175 LLPALYMLNASPITDSIDTLRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYS 234
           +  AL+ L     + + D  ++A  LL    PHI  ++   S   S     N+ + + ++
Sbjct: 187 IPIALHYLGLPYNSHNPDDYKKAQELLLKLRPHIAYFDS--SRFISDLANGNVCVVLGWA 244

Query: 235 GDHYSLNRFF----NTQDWDFSVP-EGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDI 289
           G      +      N ++  +S+P EG P +WV+ M   + +PN  Q  AF++++++P++
Sbjct: 245 GGVSDAQKASELAGNHRNLVYSIPREGAP-VWVESMVQLNDAPNPEQGLAFINYMLRPEV 303

Query: 290 AAINAEYIRAASPNYKARALLPVEHREDLSIY 321
            A ++ Y+   + N  A AL+  + R++  +Y
Sbjct: 304 IAESSNYLSYPNANKDATALVEKKIRDNPGVY 335