Pairwise Alignments

Query, 359 a.a., norspermidine sensor from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 25/341 (7%)

Query: 32  SALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERSLLMLKSVQLPFDIMVLDN 91
           +A  ++VY W D I  + +  +   +G+ V    FD+++     +L   +  +D++V  N
Sbjct: 22  AAPTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEGKLLAG-RTGYDVVVPSN 80

Query: 92  VSAFIFSRQNVFE--DLTALPNRANNDPMWLQAC------GTHAVPYFWGSVGIAY---- 139
                 ++   F   D + LPN  + DP  L+          +AVPY WG+ GI Y    
Sbjct: 81  HFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYLWGTNGIGYNVDK 140

Query: 140 -RKSLFDKPPTQWS---EVVDIAPAHRGRVGMLKDSVETLLPA-LYMLNASPITDSIDTL 194
            + +L       W+   E  ++    +  V  + DS + L PA L  L   P ++     
Sbjct: 141 VKAALGVDHIDSWAVLFEPENLKKLKQCGVAFM-DSPDELFPAVLNYLGMDPRSEKPGDY 199

Query: 195 RQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHY-SLNRFFNTQDW---D 250
            +A   L    P+I TY +   YV      D + +A  YSGD + + NR    ++     
Sbjct: 200 AKAEARLLELRPYI-TYFHSSKYVSDLANGD-VCIAFGYSGDVFQAANRAVEAKNGVKVA 257

Query: 251 FSVPEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALL 310
           +S+P+    LW D +A+   + N  QA AF+++L+ P + A  +  +  A+ N  A+A +
Sbjct: 258 YSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANPDAKAYM 317

Query: 311 PVEHREDLSIYLPEQRLAEGIIDSELSAKNLSLRAKIISSV 351
                 +  IY P++ L +  I S  S K + +  +  S +
Sbjct: 318 DASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKI 358